Pathogen | Capture probe | Sequence (5′ to 3′)a | Location | Referenceb |
---|---|---|---|---|
DENV | DEN-10731c | GGGAGGCCATGCGCCATGGAAGCTGTACGCATGGTGTAGCAGACT | 10,443–10,487 | GQ398257 |
DENV-1 | DEN1-X10830 | GCCCAACACCAGGGGAAG | 10,520–10,537 | FJ687426 |
DENV-2 | DEN2-X10831 | GCCCAAGGYGAGATGAAGCT | 10,535–10,554 | GQ398257 |
DENV-3 | DEN3-X10829 | GGCCCGAGCACTGAGGGAAGC | 10,507–10,527 | FJ898444 |
DENV-4 | DEN4-X10714 | CGTAATAATCCCTAGGGAGGCC | 10,380–10,401 | EF457906 |
JEV | JEV-10726 | CCCACGGCCCAAGCCTCGTCTAGGAT | 10,703–10,728 | EF107523 |
YFV | YFV-10679 | CCTCCGCTACCACCCTCCCAC | 10,667–10,687 | U54798 |
WNV | WNV-10768 | AACTTCAAAGCCCAATGTCAGACCACG | 10,650–10,676 | EU249803 |
SLEV | SLE-10553 | GTGCAAAGCCCCTCATTCCGACTCG | 10,522–10,546 | FJ753286 |
EEEV | EEEV-11424 | GTTCGATGTACTTCCGAGCTATGGTGACGGTGG | 11,393–11,425 | AY705241 |
CHIKV | CHIKV-7427 | ATGGCCACCTTTGCAAGCTC | 7,421–7,440 | DQ443544 |
WEEV | WEEV-8304 | TCGAATGTCACGTTCCCATGCGACAAAC | 8,277–8,304 | AF214040 |
VEEV | VEEV-50 | AAATGGAGAAAGTTCACGTTGACATCGAGG | 42–71 | U34999 |
Plasmodium | MAL-1207d | TTAGATTGCTTCCTTCAGTACCTTATGAGA | 547–576 | HQ283215 |
P. falciparum1 | PF1-1187 | CTTTCGAGGTGACTTTTAGA | 532–551 | HQ283215 |
P. falciparum2 | PF2-1182 | AGCATTTCTTAGGGAATGTTGATTTTATAT | 573–602 | HQ283222 |
P. vivax | PV-1173 | AGAGTTTTCTCTTCGGAGTTTA | 525–546 | HQ283223 |
P. malariae | PM-1181 | ATTCATATTAATGAGTGTTTCTTTTAGATAGCT | 569–601 | AF145336 |
P. ovale | PO-1152 | TGGATGAAAARTTTTTAAATAAGAAAATTCCTTTC | 391–425 | JX977167 |
W. bancrofti | WB-53 | AGTATGAATGGAATTTTTAGCAATTTTTTTG | 52–82 | L20344 |
B. malayi/ B. timori | BM-113 | ATAAGCTTTTTTTAGTAGTTTTGGCACTTAATT | 184–216 | M12691 |
Quality controle | QC | TTTTTTTTTTTTTTTTTTTT | Â | Â |
Negative controlf | NC | CAGAGATACATTGACC | 1,215–1,230 | NM_001128925 |