Table 3 Genotyping results of samples from dogs infected by Giardia duodenalis (at all different loci)

1

Shelter Dog

C

2

Shelter Dog

C

3

Shelter Dog

C

D

C + D

4

Shelter Dog

D

5

Shelter Dog

C

BIV-like

6

Shelter Dog

C

7

Shelter Dog

C

C

AI

8

Shelter Dog

C

C

9

Shelter Dog

C

10

Household Dog

A

11

Household Dog

C

C + D

12

Shelter Dog

D

D

13

Shelter Dog

C

AI

14

Shelter Dog

C

C

15

Shelter Dog

D

D

16

Shelter Dog

C

AI + C + D

C

17

Shelter Dog

C

C + D

18

Household Dog

C

C

C

19

Shelter Dog

D

D

20

Shelter Dog

D

21

Shelter Dog

D

D

D

D

22

Shelter Dog

C + D

23

Household Dog

C

24

Household Dog

25

Household Dog

D

D

26

Household Dog

D

D

27

Household Dog

C

28

Household Dog

C

C

C

C

29

Household Dog

A

AI

AI + C + D

AI

30

Household Dog

C

31

Household Dog

D

D

D

D

32

Household Dog

D

D

D

D

33

Shelter Dog

C

C

C + D

C

34

Shelter Dog

C

C

C

C

35

Shelter Dog

D

D

D

D

36

Shelter Dog

C

C

C + D

C

37

Shelter Dog

C

38

Shelter Dog

C

C

C

C

39

Shelter Dog

C

C + D

C

40

Shelter Dog

C

C

41

Shelter Dog

D

42

Household Dog

D

43

Household Dog

C

C

44

Household Dog

D

D

45

Household Dog

C

C

46

Shelter Dog

C

C + D

C

47

Household Dog

C

48

Shelter Dog

C

D

D

49

Shelter Dog

C

50

Shelter Dog

C

51

Shelter Dog

C

D

52

Shelter Dog

D

D

53

Shelter Dog

D

C + D

D

54

Shelter Dog

C

C

55

Shelter Dog

C

C

56

Shelter Dog

C

C

C + D

C

57

Shelter Dog

C

D

D

C

58

Shelter Dog

59

Shelter Dog

D

D

60

Shelter Dog

C

C

C

61

Shelter Dog

C

62

Shelter Dog

C

63

Shelter Dog

C

C

64

Shelter Dog

C

65

Shelter Dog

C

66

Shelter Dog

C

C

67

Shelter Dog

C

C

C

68

Shelter Dog

C

69

Shelter Dog

C

70

Shelter Dog

C

C

C

71

Shelter Dog

C

D

72

Household Dog

D

73

Shelter Dog

D

D

74

Shelter Dog

C

75

Shelter Dog

D

D

76

Shelter Dog

77

Shelter Dog

D

78

Shelter Dog

79

Shelter Dog

C

80

Shelter Dog

C

81

Shelter Dog

C

82

Shelter Dog

C

C

83

Shelter Dog

D

84

Household Dog

C

85

Shelter Dog

AI

86

Shelter Dog

C

87

Household Dog

C

C

C

88

Household Dog

89

Household Dog

90

Household Dog

D

C + D

91

Household Dog

D

92

Shelter Dog

AII

93

Shelter Dog

A

94

Shelter Dog

D

95

Shelter Dog

C

96

Shelter Dog

D

97

Household Dog

C

98

Shelter Dog

D

99

Shelter Dog

100

Shelter Dog

D

101

Shelter Dog

102

Shelter Dog

103

Household Dog

D

104

Household Dog

D

D

105

Household Dog

D

AII

106

Household Dog

C