Table 2 List of known microRNAs expressed in An. anthropophagus midguts
Transcripts per million reads(TPM) | Fold change | Reference miRNA database | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
No. | Name | Length | Sequence | SF | BF | PI | BF vs SF | PI vs BF | aga | aae |
1 | aan-bantam | 23 | UGAGAUCACUUUGAAAGCUGAUU | 45,048.5 | 24,928 | 74,181 | 0.553 | 2.975 | Y | Y |
2 | aan-let-7 | 21 | UGAGGUAGUUGGUUGUAUAGU | 1,079.9 | 646.7 | 1,199.2 | 0.598 | 1.854 | Y | Y |
3 | aan-miR-1*# | 22 | UGGAAUGUAAAGAAGUAUGGAG | 78 | 20.6 | 75.5 | 0.264 | 3.665 | Y | Y |
4 | aan-miR-10 | 22 | ACCCUGUAGAUCCGAAUUUGUU | 60.7 | 51.9 | 136 | 0.855 | 2.62 | Y | Y |
5 | aan-miR-100# | 22 | AACCCGUAGAUCCGAACUUGUG | 6,270.2 | 4632 | 17,444 | 0.738 | 3.766 | Y | Y |
6 | aan-miR-1000 | 21 | AUAUUGUCCUGUCACAGCAGU | 56.6 | 129.1 | 115 | 2.280 | 0.89 | Y | Y |
7 | aan-miR-11 | 22 | CAUCACAGUCUGAGUUCUUGCU | 3,794.7 | 1775.7 | 2,952.7 | 0.467 | 1.662 | Y | Y |
8 | aan-miR-1174 | 21 | UCAGAUCUACUUAAUACCCAU | 4,040 | 1,674 | 3,367.6 | 0.414 | 2.011 | Y | Y |
9 | aan-miR-1175-3p* | 24 | UGAGAUUCUACUUCUCCGACUUAA | 7,421.2 | 2,027 | 4,887.2 | 0.273 | 2.411 | Y | Y |
10 | aan-miR-12*# | 23 | UGAGUAUUACAUCAGGUACUGGU | 5,206.8 | 1,768.2 | 13,763.1 | 0.339 | 7.783 | Y | Y |
11 | aan-miR-125 | 22 | UCCCUGAGACCCUAACUUGUGA | 308.6 | 257.7 | 791.3 | 0.835 | 3.07 | Y | Y |
12 | aan-miR-13*# | 23 | UAUCACAGCCAUUUUGACGAGUU | 790.5 | 241.7 | 1,988.8 | 0.305 | 8.228 | Y | |
13 | aan-miR-133# | 22 | UUGGUCCCCUUCAACCAGCUGU | 96.3 | 87.3 | 17.4 | 0.906 | 0.199 | Y | Y |
14 | aan-miR-137 | 22 | UAUUGCUUGAGAAUACACGUAG | 20.1 | 14.8 | 34.9 | 0.736 | 2.358 | Y | |
15 | aan-miR-14# | 22 | UCAGUCUUUUUCUCUCUCCUAU | 8,439 | 3,009.3 | 1,009.7 | 0.356 | 0.335 | Y | Y |
16 | aan-miR-184 | 22 | UGGACGGAGAACUGAUAAGGGC | 6,949.9 | 4,432 | 9,130 | 0.637 | 2.06 | Y | Y |
17 | aan-miR-1890 | 22 | UGAAAUCUUUGAUUAGGUCUGG | 112.6 | 41.8 | 80.2 | 0.371 | 1.918 | Y | Y |
18 | aan-miR-1891 | 22 | UGAGGAGUUAAUUUGCGUGUUU | 3.8 | 3.2 | 3.5 | 0.842 | 1.093 | Y | Y |
19 | aan-miR-190 | 24 | AGAUAUGUUUGAUAUUCUUGGUUG | 47 | 37.6 | 34.9 | 0.8 | 0.928 | Y | Y |
20 | aan-miR-193 | 22 | UACUGGCCUACUAAGUCCCAAC | 0.2 | 0 | 0 | 0 | – | Y | Y |
21 | aan-miR-210# | 19 | CUUGUGCGUGUGACAACGG | 5.1 | 11.1 | 0 | 2.176 | – | Y | Y |
22 | aan-miR-252*# | 21 | UAAGUACUAGUGCCGCAGGAG | 59 | 192 | 0 | 3.254 | – | Y | |
23 | aan-miR-263a# | 23 | AAUGGCACUGGAAGAAUUCACGG | 36.3 | 50.8 | 262.7 | 1.399 | 5.17 | Y | Y |
24 | aan-miR-263b-5p | 23 | CUUGGCACUGGGAGAAUUCACAG | 0.2 | 1.1 | 0 | 5.5 | – | Y | |
25 | aan-miR-275# | 20 | UCAGGUACCUGAAGUAGCGC | 3,269.4 | 9,040.2 | 2,035.9 | 2.765 | 0.225 | Y | Y |
26 | aan-miR-276*# | 20 | AGCGAGGUAUAGAGUUCCUA | 23.9 | 7.4 | 27.9 | 0.309 | 3.770 | Y | Y |
27 | aan-miR-277-5p | 22 | UAAAUGCACUAUCUGGUACGAC | 15.3 | 7.7 | 14.9 | 0.503 | 1.935 | Y | Y |
28 | aan-miR-278 | 23 | ACGGACGAUAGUCUUCAGCGGCC | 55.7 | 22.8 | 31.4 | 0.409 | 1.377 | Y | Y |
29 | aan-miR-279* | 22 | UGACUAGAUCCACACUCAUUAA | 2,787.5 | 926.2 | 1,746.5 | 0.332 | 1.885 | Y | Y |
30 | aan-miR-283* | 24 | CAAUAUCAGCUGGUAAUUCUGGGC | 1,231.3 | 407.5 | 693.7 | 0.330 | 1.702 | Y | Y |
31 | aan-miR-285 | 22 | UAGCACCAUUCGAAAUCAGUAC | 10.4 | 23 | 18.6 | 2.211 | 0.808 | Y | |
32 | aan-miR-2944a | 24 | GAAGGAACUUCUGCUGUGAUCUGA | 9.9 | 7.1 | 14.9 | 0.717 | 2.098 | Y | |
33 | aan-miR-2944b | 23 | GAAGGAACUCCCGGUGUGAUAUA | 1.2 | 0 | 0 | 0 | – | Y | |
34 | aan-miR-2a# | 23 | UAUCACAGCCAGCUUUGAAGAGC | 3,687.6 | 1,745.2 | 415.5 | 0.473 | 0.238 | Y | |
35 | aan-miR-2b* | 24 | UAUCACAGCCAGCUUUGAUGAGCU | 791.7 | 269.1 | 618.2 | 0.339 | 2.297 | Y | |
36 | aan-miR-2c | 23 | UAUCACAGCCAGCUUUGAUGAGC | 657.4 | 228 | 435.7 | 0.346 | 1.910 | Y | |
37 | aan-miR-305-5p | 24 | AUUGUACUUCAUCAGGUGCUCUGG | 2,879.6 | 1,101.7 | 3,594 | 0.382 | 3.262 | Y | Y |
38 | aan-miR-306 | 22 | UCAGGUACUGGAUGACUCUCAG | 14,095.1 | 11,671.1 | 11,518.1 | 0.828 | 0.986 | Y | |
39 | aan-miR-307 | 20 | UCACAACCUCCUUGAGUGAG | 1.3 | 0 | 0 | 0 | – | Y | Y |
40 | aan-miR-308-5p# | 22 | AAUCACAGGAGUAUACUGUGAG | 85.4 | 39.7 | 338.2 | 0.464 | 8.518 | Y | Y |
41 | aan-miR-309 | 22 | UCACUGGGCAAAGUUUGUCGCA | 0.2 | 0 | 3.5 | 0 | – | Y | |
42 | aan-miR-31# | 23 | UGGCAAGAUGUUGGCAUAGCUGA | 27.3 | 10.7 | 207 | 0.392 | 19.35 | Y | |
43 | aan-miR-315-5p* | 22 | UUUUGAUUGUUGCUCAGAAAGC | 2.9 | 12.2 | 7 | 4.206 | 0.573 | Y | Y |
44 | aan-miR-317 | 24 | UGAACACAUCUGGUGGUAUCUCAG | 6,342 | 6,462.2 | 2,795.8 | 1.018 | 0.432 | Y | |
45 | aan-miR-34 | 20 | UGGCAGUGUGGUUAGCUGGU | 584.9 | 347.7 | 990.1 | 0.594 | 2.847 | Y | Y |
46 | aan-miR-375-1 | 22 | UUUGUUCGUUUGGCUCGAGUUA | 10 | 6.9 | 20.9 | 0.69 | 3.028 | Y | Y |
47 | aan-miR-71-3p | 22 | UCUCACUACCUUGUCUUUCAUG | 279.6 | 174.3 | 100.6 | 0.623 | 0.577 | Y | |
48 | aan-miR-79-5p | 22 | UAAAGCUAGAUUACCAAAGCAU | 1.4 | 0 | 3.7 | 0 | – | Y | Y |
49 | aan-miR-8-5p | 23 | UAAUACUGUCAGGUAAAGAUGUC | 1,990.3 | 3,340.8 | 2,245.8 | 1.678 | 0.672 | Y | Y |
50 | aan-miR-87 | 21 | GGUGAGCAAAUAUUCAGGUGU | 3.3 | 2.6 | 0 | 0.787 | 0 | Y | |
51 | aan-miR-927 | 22 | UUUAGAAUUCCUACGCUUUACC | 142 | 156.1 | 156.9 | 1.099 | 1.005 | Y | |
52 | aan-miR-92a* | 22 | UAUUGCACUUGUCCCGGCCUAU | 2,103.2 | 17,462.4 | 8,613.8 | 8.3 | 0.493 | Y | |
53 | aan-miR-92b*# | 22 | AAUUGCACUUGUCCCGGCCUGC | 503.4 | 2,215.5 | 366 | 4.40 | 0.165 | Y | Y |
54 | aan-miR-932-3p* | 23 | UCAAUUCCGUAGUGCAUUGCAGU | 1.7 | 10.4 | 7.4 | 6.117 | 0.711 | Y | |
55 | aan-miR-957# | 22 | UGAAACCGUCCAAAACUGAGGC | 98.6 | 260.4 | 31.4 | 2.640 | 0.120 | Y | Y |
56 | aan-miR-965-1 | 22 | UAAGCGUAUAGCUUUUCCCAUU | 2 | 0 | 7.4 | 0 | – | Y | Y |
57 | aan-miR-970 | 21 | UCAUAAGACACACGCGGCUAU | 4,435.5 | 2,880.7 | 1,837.2 | 0.649 | 0.637 | Y | Y |
58 | aan-miR-980# | 24 | CGGCCGUUCAUUGGGUCAUCUAGC | 25.5 | 26.9 | 4.9 | 1.054 | 0.182 | Y | |
59 | aan-miR-981 | 22 | UUCGUUGUCGACGAAACCUGCA | 3.5 | 7.7 | 7.4 | 2.2 | 0.961 | Y | Y |
60 | aan-miR-988-5p | 22 | CCCCUUGUUGCAAACCUCACGC | 4 | 2.2 | 7.4 | 0.55 | 3.363 | Y | Y |
61 | aan-miR-989* | 21 | UGUGAUGUGACGUAGUGGUAC | 78 | 360 | 314 | 4.615 | 0.872 | Y | Y |
62 | aan-miR-996* | 21 | UGACUAGAUUACAUGCUCGUC | 6,082.2 | 1,855 | 5,933.3 | 0.305 | 3.198 | Y | Y |
63 | aan-miR-998 | 19 | UAGCACCAUGAGAUUCAGC | 3.5 | 0.5 | 3.7 | 0.142 | 7.4 | Y | |
64 | aan-miR-9a | 23 | UCUUUGGUUAUCUAGCUGUAUGA | 1,308.7 | 650.5 | 2,178.8 | 0.497 | 3.349 | Y | Y |
65 | aan-miR-9b | 24 | UCUUUGGUGAUUUUAGCUGUAUGC | 2,386.6 | 1,190.8 | 3,806.8 | 0.499 | 3.196 | Y | Y |
66 | aan-miR-9c | 22 | UCUUUGGUAUUCUAGCUGUAGA | 8,976.6 | 4,496.3 | 12,856.5 | 0.500 | 2.859 | Y | Y |
67 | aan-miR-iab-4# | 22 | ACGUAUACUGAAUGUAUCCUGA | 14.6 | 3.3 | 26.1 | 0.226 | 7.909 | Y | Y |