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Table 3 Comparison of the putative amino acid sequences of the Ochlerotatus caspius flavivirus Turkey (OCFVt) with other mosquito-specific or mosquito-borne flaviviruses

From: Co-circulation of West Nile virus and distinct insect-specific flaviviruses in Turkey

 

OCFVt

OCFV

HANKV

PARV

CTFV153

CxFTokyo

QBV

CFAV

WNVT2

Size

Size

ID%

Size

ID%

Size

ID%

Size

ID%

Size

ID%

Size

ID%

Size

ID%

Size

ID%

C + AC

137

137

95.6

137

93.4

140

42.5

136

18.7

139

20.6

136

21.9

136

19.7

123

18.8

PrM + M

147

147

99.3

147

93.8

147

61.9

142

34.4

143

33.1

142

36.4

142

40.5

167

13.7

E

431

431

98.3

431

95.8

431

70.9

427

45.2

427

46.8

427

44.3

427

46.4

501

17.3

NS1

392

392

98.9

392

97.9

396

75.0

369

42.8

369

42.5

369

43.5

390

46.5

352

21.8

NS2a

214

214

99.5

214

96.2

212

61.6

228

17.1

230

20.9

229

20.1

232

22.6

231

14.1

NS2b

149

149

100

149

99.3

149

57.7

143

18.7

142

20.8

143

17.4

124

18.1

131

14.7

NS3

600

600

99.3

600

97.5

599

73.5

577

39.8

578

39.1

578

39.1

577

45.1

619

30.5

NS4a

161

161

98.7

161

96.2

161

64.5

189

16.4

189

17.1

188

17.4

145

17.7

126

8.6

NS4b

260

260

96.9

260

96.9

259

67.4

257

15.6

257

19.8

258

14.8

280

20.2

278

11.8

NS5

894

789

98.7a

894

98.2

890

83.3

889

60.7

889

60.1

889

61.7

888

59.2

905

44.1

ORF

3,385

  

3,385

 

3,384

 

3,357

 

3,363

 

3,359

 

3,341

 

3,433

 
  1. AbbreviationsOCFVt Ochlerotatus caspius flavivirus Turkey (KY345399); OCFV Ochlerotatus caspius flavivirus (HF548540); HANKV Hanko virus (JQ268258); PARV Parramatta River virus isolate 92-B115745 (KT192549); CTFV153 Culex theileri flavivirus isolate 153 (HE574573); CxFTokyo Culex flavivirus strain Tokyo (AB262759); QBV Quang Binh virus (NC012671); CFAV Cell fusion agent virus (NC001564); WNVT2 West Nile virus strain T2 from Turkey (KJ958922)
  2. aBased on the 789 amino acid partial sequence available for this strain