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Table 2 Windows of directional selection for genomic regions with shared iHS score 2.5

From: Pooled-DNA sequencing identifies genomic regions of selection in Nigerian isolates of Plasmodium falciparum

Chromosome

Window

Region (kb)

Number of SNPs with iHS > 2.5

ID of genes within region

Start

Stop

   

1

163

184

21

4

PF3D7_0103600 - PF3D7_0104200

2

302

515

213

1

PF3D7_0210900 - PF3D7_0213600

4

407

585

178

2

PF3D7_0409600 - PF3D7_0413300

5

822

1007

185

12

PF3D7_0519800 - PF3D7_0524200

6a

1039

1297

258

32

PF3D7_0625100 - PF3D7_0630600

7

238

249

11

4

PF3D7_0704550 - PF3D7_0704900

9

1060

1220

160

15

PF3D7_0929320 - PF3D7_0930500

10

1210

1557

347

10

PF3D7_1029500 - PF3D7_103880

11

1190

1310

200

8

PF3D7_1132920 - PF3D7_1133600

12

1451

1880

429

6

PF3D7_1234900 - PF3D7_1248500

13

303

358

55

3

PF3D7_1306470 –PF33D7_130790

13

2410

2520

110

3

PF3D7_1306470 - PF3D7_1307900

14

1910

1932

22

2

PF37_1407000 - PF3D7_1447900

  1. aSelective sweep on chromosome 6 with 32 SNPs within the shared iHS region