Skip to main content

Table 2 Features of the tick pools characterized via amplicon sequencing

From: Generic amplification and next generation sequencing reveal Crimean-Congo hemorrhagic fever virus AP92-like strain and distinct tick phleboviruses in Anatolia, Turkey

Code

Province

Species

Pool composition

Host collection method

Virus detected

GenBank accession number

1

KM6

Mersin

R. sanguineus complex

1♀, 1♂

Dog

CCHFV

KY963543 (CCHFV)

2

KM3

Mersin

R. sanguineus complex

4♀, 6♂

Dog

Tick Phlebovirus (novel lineage) - CCHFV

KY965971 (Phlebovirus), KY963544 (CCHFV)

3

ET35

Van

R. bursa

1♂

Sheep

Tick Phlebovirus (KarMa lineage) -CCHFV

KY979161 (Phlebovirus), KY963542 (CCHFV)

4

ET36

Van

R. bursa

1♀

Sheep

Tick Phlebovirus (KarMa lineage) -CCHFV

KY966010 (Phlebovirus), KY963540 (CCHFV)

5

ET37

Van

R. bursa

1♀

Goat

Tick Phlebovirus (KarMa lineage) -CCHFV

KY966002 (Phlebovirus), KY963541 (CCHFV)

6

KM2

Mersin

R. sanguineus complex

2♀, 1 nymph

Dog

Tick Phlebovirus (novel lineage)

KY965970

7

KM11

Mersin

R. sanguineus complex

2♀, 3♂

Dog

Tick Phlebovirus (novel lineage)

KY965972

8

KM12

Mersin

R. sanguineus complex

3♀

Dog

Tick Phlebovirus (novel lineage)

KY965992

9

KM15

Mersin

R. sanguineus complex

1♀

Dog

Tick Phlebovirus (novel lineage)

KY965973

10

KM17

Mersin

R. sanguineus complex

9♀, 2♂

Dog

Tick Phlebovirus (novel lineage)

KY965974

11

KM19

Mersin

R. sanguineus complex

1♀, 1♂

Dog

Tick Phlebovirus (novel lineage)

KY965993

12

KM21

Mersin

R. sanguineus complex

4♀

Dog

Tick Phlebovirus (novel lineage)

KY965975

13

KM22

Mersin

R. sanguineus complex

2♀, 1♂

Dog

Tick Phlebovirus (novel lineage)

KY965976

14

KM23

Mersin

R. sanguineus complex

3♀, 2♂

Dog

Tick Phlebovirus (novel lineage)

KY965977

15

KM24

Mersin

R. sanguineus complex

2♀, 3♂

Dog

Tick Phlebovirus (novel lineage)

KY965995

16

KM25

Mersin

R. sanguineus complex

3♀, 2♂

Dog

Tick Phlebovirus (novel lineage)

KY965978

17

KM26

Mersin

R. sanguineus complex

4♀, 4♂

Dog

Tick Phlebovirus (novel lineage)

KY965979

18

KM27

Mersin

R. sanguineus complex

1♀, 1♂

Dog

Tick Phlebovirus (novel lineage)

KY965980

19

KM29

Mersin

R. sanguineus complex

1♀

Dog

Tick Phlebovirus (novel lineage)

KY965981

20

KM30

Mersin

R. sanguineus complex

5♀, 1♂

Dog

Tick Phlebovirus (novel lineage)

KY965982

21

KM31

Mersin

R. sanguineus complex

7♀, 1♂

Dog

Tick Phlebovirus (novel lineage)

KY965994

22

KM33

Mersin

R. sanguineus complex

1♂

Dog

Tick Phlebovirus (novel lineage)

KY965983

23

KM35

Mersin

R. sanguineus complex

1♀, 2♂

Dog

Tick Phlebovirus (novel lineage)

KY965984

24

KM41

Mersin

R. sanguineus complex

1♀

Dog

Tick Phlebovirus (novel lineage)

KY965998

25

KM49

Mersin

R. sanguineus complex

2♀, 2♂

Dog

Tick Phlebovirus (novel lineage)

KY965985

26

KM50

Mersin

R. sanguineus complex

2♀, 2♂

Dog

Tick Phlebovirus (novel lineage)

KY965986

27

KM51

Mersin

R. sanguineus complex

1♀, 5 nymphs

Dog

Tick Phlebovirus (novel lineage)

KY965987

28

KM55

Mersin

R. sanguineus complex

2♀

Dog

Tick Phlebovirus (novel lineage)

KY965988

29

KM59

Mersin

R. sanguineus complex

2♀

Dog

Tick Phlebovirus (novel lineage)

KY965989

30

KM60

Mersin

R. sanguineus complex

2♀, 1♂

Dog

Tick Phlebovirus (novel lineage)

KY965990

31

KM36

Mersin

R. sanguineus complex

3♂, 1♀

Dog

Tick Phlebovirus (Lesvos lineage)

KY965991

32

CA16

Cankiri

Hae. parva

17♀

Goat

Tick Phlebovirus (Lesvos lineage)

KY965997

33

MU43

Mugla

R. sanguineus complex

2♀

Dog

Tick Phlebovirus (novel lineage)

KY965996

34

ET2

Van

R. bursa

1♀

Cattle

Tick Phlebovirus (KarMa lineage)

KY966006

35

ET20

Van

R. sanguineus complex

1♂

Cattle

Tick Phlebovirus (Antigone lineage)

KY966007

36

ET11

Van

H. marginatum

1♂

Sheep

Tick Phlebovirus (Bole lineage)

KY966005

37

ET25

Van

H. aegyptium

1♀

Sheep

Tick Phlebovirus (Bole lineage)

KY979160

38

ET26

Van

H. aegyptium

1♀

Goat

Tick Phlebovirus (Bole lineage)

KY965999

39

ET29

Van

H. aegyptium

1♂

Sheep

Tick Phlebovirus (Bole lineage)

KY966003

40

ET31

Van

R. bursa

1♀

Goat

Tick Phlebovirus (KarMa lineage)

KY966011

41

ET32

Van

R. bursa

1♀

Goat

Tick Phlebovirus (KarMa lineage)

KY966008

42

ET33

Van

R. bursa

1♀

Sheep

Tick Phlebovirus (KarMa lineage)

KY966009

43

ET6

Diyarbakir

H. excavatum

1♂

Cattle

Tick Phlebovirus (Bole lineage)

KY966001

44

ET14

Diyarbakir

H. marginatum

1♂

Sheep

Tick Phlebovirus (Bole lineage)

KY966000

45

ET7

Siirt

H. marginatum

1♂

Sheep

Tick Phlebovirus (Bole lineage)

KY966004