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Table 2 Statistics of sequence reads mapped to chromosomes

From: Differential gene expression in Anopheles stephensi following infection with drug-resistant Plasmodium yoelii

Sample name R_As24h S_As24h R_As13d S_As13d R_As19d S_As19d
Total reads 48,696,660 45,974,494 50,759,128 46,720,102 49,154,934 43,544,700
Total mapped (%) 33,863,898 (69.54) 31,833,061 (69.24) 32,893,865 (64.8) 31,436,501 (67.29) 33,605,516 (68.37) 30,132,506 (69.2)
Multiple mapped (%) 360,551 (0.74) 335,293 (0.73) 390,620 (0.77) 375,385 (0.8) 387,500 (0.79) 354,761 (0.81)
Uniquely mapped (%) 33,503,347 (68.8) 31,497,768 (68.51) 32,503,245 (64.03) 31,061,116 (66.48) 33,218,016 (67.58) 29,777,745 (68.38)
Reads map to ‘+’ (%) 16,759,346 (34.42) 15,759,435 (34.28) 16,246,792 (32.01) 15,544,924 (33.27) 16,616,630 (33.8) 14,899,272 (34.22)
Reads map to ‘−’ (%) 16,744,001 (34.38) 15,738,333 (34.23) 16,256,453 (32.03) 15,516,192 (33.21) 16,601,386 (33.77) 14,878,473 (34.17)
Non-splice reads (%) 25,443,056 (52.25) 23,876,914 (51.94) 24,708,873 (48.68) 22,802,795 (48.81) 24,659,025 (50.17) 22,113,465 (50.78)
Splice reads (%) 8,060,291 (16.55) 7,620,854 (16.58) 7,794,372 (15.36) 8,258,321 (17.68) 8,558,991 (17.41) 7,664,280 (17.6)
  1. Note: Multiple mapped, number of reads mapped to multiple sites; uniquely mapped, number of reads mapped to one site only; Reads mapped to ‘+’ or ‘−’, mapped to ‘+’ or ‘−’ strands of DNA; Splice reads, number of reads mapped to splice sites