Species | Variant (flaB) | n | GenBank | Reference in GenBank | Similarity (%) | Nucleotide identity | Type of area | Origin of samples (n) |
---|---|---|---|---|---|---|---|---|
Ba | Ba_V1a | 118 | MF150047 | CP018262, KF990318, KX646195, KF894064 | 100 | 544/544 | NU | BNW (8), BSW (9), BPP (4), WBF (37), WKF (20), WLP (40) |
Ba_V1b | 1 | MF150048 | CP018262, KF990318, KX646195, KF894064 | 99.8 | 543/544 | N | BSW (1) | |
Ba_V2cc | 1 | MF150049 | KR782215, JN828691 | 99.8 | 543/544 | U | WBF (1) | |
Ba_V2ct | 9 | MF150050 | CP018262, KF990318, KX646195, KF894064 | 99.8 | 543/544 | NU | BNW (1), BSW (2), WBF (2), WLP (4) | |
Ba_V2tc | 14 | MF150051 | KR782215, JN828691 | 100 | 544/544 | NU | BPP (1), WBF (7), WKF (1), WLP (5), | |
Bb | Bb_V1a | 1 | MF150046 | CP009656 | 98.0 | 536/547 (3 gaps) | U | WKF (1) |
Bb_V2 | 13 | MF150052 | KX646201, KF422803, CP001205 | 100 | 544/544 | NU | BNW (2), WBF (1), WKF (9), WLP (1) | |
Bb_V3 | 5 | MF150053 | DQ016620, AB035618 | 100 | 544/544 | U | WBF (1), WKF (2), WLP (2) | |
Bb_V5 | 1 | MF150054 | CP009656 | 100 | 544/544 | U | WKF (1) | |
Bb_V6 | 1 | MF150055 | CP009656 | 99.8 | 543/544 | U | WKF (1) | |
Bb_V7 | 8 | MF150056 | DQ016625, KF836508, AB091813, AB052665, CP002312 | 100 | 544/544 | NU | BNW (1), WKF (3), WLP (4) | |
Bg | Bg_vA | 20 | MF150057 | HM345898, JN828685, AB178327 | 100 | 544/544 | NU | BNW (8), BSW (5), BPP (2), WBF (2), WKF (3) |
Bg_vAa | 3 | MF150058 | AB091814 | 100 | 544/544 | NU | BNW (1) | |
Bg_vB | 11 | MF150059 | HM345905, KF836512 | 100 | 544/544 | NU | BNW (3), BSW (4), BPP (3), WKF (1) | |
Bg_vBa | 1 | MF150060 | KX646196, KF990320, JN828685, AB178327 | 99.8 | 543/544 | N | BSW (1) | |
Bg_vBb | 1 | MF150061 | HM345905, KF836512 | 99.8 | 543/544 | N | BPP (1) | |
Bg_vC | 6 | MF150062 | KX646196, KF990320, JN828685 | 99.8 | 543/544 | N | BNW (1), BSW (4), BPP (1) | |
Bg_vCa | 4 | MF150063 | KX646196, KF990320, JN828685 | 99.8 | 543/544 | N | BNW (1), BSW 1 BPP (2) | |
Bg_vDa | 1 | MF150064 | KF836510, KF918606 | 99.8 | 543/544 | N | BSW (1) | |
Bg_vDb | 1 | MF150065 | KX646202, JN828682, AB178330 | 99.3 | 543/544 | N | BSW (1) | |
Bg_vDc | 1 | MF150066 | KF990322 | 100 | 544/544 | N | BSW (1) | |
Bg_vDd | 4 | MF150067 | KX646202, JN828682, AB178330, KF894053, KF894052 | 100 | 544/544 | N | BNW (2), BSW (1), BPP (1) | |
Bg_vDe | 1 | MF150068 | KX646202, JN828682, AB178330, KF894053, KF894052 | 99.4 | 541/544 | N | BSW (1) | |
Bg_vDf | 2 | MF150069 | KX646202, JN828682, AB178330, KF894053, KF894052 | 99.6 | 542/544 | N | BNW (1), BSW (1) | |
Bg_vEa | 2 | MF150070 | KF990320, HM345902, JN828685, AB178327, KF894058 | 99.8 | 543/544 | NU | BSW (2) | |
Bg_vEb | 3 | MF150071 | KF894058, HM345901 | 100 | 544/544 | NU | BNW (1), WBF (1), WKF (1) | |
Bg | Bg_vEc | 4 | MF150072 | KF894061, KF422820, HM345897, AB178326 | 100 | 544/544 | U | WBF (2), WKF (1), WLP (1) |
Bg_vEd | 2 | MF150073 | KF990320, HM345898, DQ650331, AB178327 | 99.4 | 541/544 | N | BSW (2) | |
Bg_vEf | 2 | MF150074 | DQ650336, DQ016621 | 99.6 | 542/544 | N | BSW (2) | |
Bl | Bl_V1 | 4 | MF150075 | KF422804, DQ016623, HM345914 | 100 | 544/544 | NU | BSW (1), WKF (3) |
Bm | Bm_V2b | 1 | KT948324 | KX646199, DQ650332 | 100 | 538/538 | U | WKF (1) |
Bm_V1b | 4 | KT948321-23 | KX646199, DQ650332 | 99.8 | 537/538 | NU | BNW (3), WKF (1) | |
Bs | Bs_V1 | 1 | MF150076 | KF422808, JF732881 | 100 | 544/544 | U | WBF (1) |
Bv | Bv_V1 | 7 | MF150077 | DQ650330, KX646197, AB178333, CP009117 | 100 | 544/544 | NU | BNW (3), BSW (1), BPP (1), WKF (2) |
Bv_V2 | 3 | MF150078 | HM345912, AB091805 | 99.8 | 543/544 | N | BNW (1), BSW (1), BPP (1) | |
Bv_V3 | 1 | MF150079 | HM345912, AB091805 | 100 | 544/544 | N | BSW (1) | |
Bv_V4 | 1 | MF150080 | KF422808, JF732881 | 99.8 | 543/544 | N | BSW (1) | |
Bv_V6 | 1 | MF150081 | KF422808, JF732881 | 99.6 | 542/544 | N | BNW (1) |