Strain | Year of collection | Multiplex PCR genotyping/DNA sequencing (no. of samples) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
VV/FF | VV/FC | VV/CC | VG/FF | VG/FC | VG/CC | GG/FF | GG/FC | GG/CC | Total | ||
Laboratory strains | |||||||||||
PMD | 10/10 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 10/10 | |
PMD-R | 0/0 | 0/0 | 10/10 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 10/10 | |
UPK-R | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 10/10 | 0/0 | 0/0 | 10/10 | |
(PMDxUPK-R) F1 hybrid | 0/0 | 0/0 | 0/0 | 10/10 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 10/10 | |
(PMD-RxUPK-R) F1 hybrid | 0/0 | 0/0 | 0/0 | 0/0 | 10/10 | 0/0 | 0/0 | 0/0 | 0/0 | 10/10 | |
YG | 0/0 | 0/0 | 1/1 | 0/0 | 1/1 | 0/0 | 5/5 | 3/3 | 0/0 | 10/10 | |
MS | 0/0 | 0/0 | 0/0 | 0/0 | 2/2 | 2/2 | 0/0 | 5/5 | 1/1 | 10/10 | |
Field-collected strains | |||||||||||
Thailand | |||||||||||
Chiang Mai city, Chiang Mai | 2016 | 0/0 | 0/0 | 15/15 | 0/0 | 20/20 | 0/0 | 12/12 | 0/0 | 0/0 | 47/47 |
Mae Taeng district, Chiang Mai | 2016 | 0/0 | 0/0 | 12/12 | 0/0 | 5/5 | 0/0 | 1/1 | 0/0 | 0/0 | 18/18 |
Mae Sariang district, Mae Hong Sona | 2010 | 0/0 | 2/2 | 6/6 | 0/0 | 6/6 | 0/0 | 2/2 | 0/0 | 0/0 | 16/16 |
Total | 10/10 | 2/2 | 44/44 | 10/10 | 44/44 | 2/2 | 30/30 | 8/8 | 1/1 | 151/151 |