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Table 4 Intra-assemblage substitutions in bg, tpi and gdh sequences from assemblage E

From: Prevalence and multilocus genotyping of Giardia duodenalis in pigs of Shaanxi Province, northwestern China

Subtype (number)

Nucleotide positions and substitutions

GenBank ID

 

57

120

180

 

bg

    

Ref. sequence

T

C

C

KU668892

E (36)

T

C

C

KY989575

 

56

143

340

 

tpi

    

Ref. sequence

C

C

C

KJ668136

E1 (6)

C

C

C

KY989581

E2 (8)

C

T

C

KY989580

E3 (1)

C

C

T

KY989582

 

68

216

285

303

 

gdh

     

Ref. sequence

T

T

C

C

JN160739

E1 (5)

T

C

C

T

MF034655

E2 (3)

T

T

T

C

MF034657

E3 (2)

T

T

T

C

MF034658