Cytochrome c oxidase subunit 1 gene as a DNA barcode for discriminating Trypanosoma cruzi DTUs and closely related species

Table 2 cox1 and GPI sequences division in groups based on ABGD analysis

Substitution model	X^a	Partition	Prior intraspecific divergence (P)
Substitution model	X^a	Partition	0.059948	0.035938	0.021544	0.012915	0.007743	0.004642	0.002783	0.001668	0.001000
cox1
Jukes Cantor	1.5	Initial	6	6	6	10	10	10	10	10	10
Jukes Cantor	1.5	Recursive			8	11	14	14	14	21	21
K2P^b	1.5	Initial	6	6	6	11	11	11	11	11	11
K2P^b	1.5	Recursive			8		14	14	14	19	19
p-distance	1.5	Initial		6	6	6	6	6	6	6	6
p-distance	1.5	Recursive		0	8	9	9	9	11	11	11
GPI
Jukes Cantor	1.5	Initial	2	2	3	3	5	7	3	14	14
Jukes Cantor	1.5	Recursive							7
K2P^b	1.5	Initial	2	2	3	3	5	7	3	14	14
K2P^b	1.5	Recursive							7
p-distance	1.5	Initial	2	2	3	3	5	5	5	7	7
p-distance	1.5	Recursive

ISSN: 1756-3305