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Table 1 Gene expression changes in IECs treated with A. ceylanicum iL3. Using RNA-Seq, gene expression was analyzed in HT-29-MTX cells treated with A. ceylanicum larvae and compared to controls (buffer treatment)

From: Ancylostoma ceylanicum infective third-stage larvae are activated by co-culture with HT-29-MTX intestinal epithelial cells

NCBI entrez gene ID

NCBI entrez gene ID

HT-29-MTX FPKM

HT-29-MTX + A. ceylanicum FPKM

Fold change

Reference

DEFB1 (defensin beta 1)

1672

9

3

-1.5

[41]

SUCNR1 (succinate receptor 1)

56670

4

2

-1.1

[42]

IFI44 (interferon-induced protein 44)

10561

2

4

1.0

[43]

LOC100190986 (uncharacterized)

100190986

3

7

1.0

 

PLK2 (polo-like kinase 2)

10769

46

24

-0.9

[44]

NEAT1 (nuclear paraspeckle assembly transcript 1)

283131

115

210

0.9

[45]

ARL14 (ADP ribosylation factor like GTPase 14)

80117

22

12

-0.9

 

PFKFB3 (6-phosphofructo-2-kinase/fuctose-2,6-biphosphatase 3)

5209

16

28

0.8

[46]

APCDD1L (APC down-regulated 1 like)

154284

5

3

-0.8

 

ADRA2A (adrenoceptor alpha 2A)

150

4

3

-0.7

 

ADM (adrenomedullin)

133

71

116

0.7

[47]

DUSP6 (dual specificity phosphatase 6)

1848

13

8

-0.7

[48]

ATF3 (activating transcription factor 3)

467

19

29

0.7

[49]

LFNG (LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase)

16858

37

24

-0.6

[50]

HES6 (hes family bHLH transcription factor 6)

55502

37

24

-0.6

 

EPHB3 (Eph receptor B3)

2049

8

5

-0.6

[51]

DDX60 (DexD/H-box helicase 60)

55601

0

1

1.9

[52]

NLRC5 (NLR family CARD domain containing 5)

84166

1

1

0.9

[53]

TACSTD2 (tumor-associated calcium signal transducer 2)

4070

35

52

0.6

[54]

  1. Notes: For each condition, n = 2. Genes were identified as differentially expressed that had a p-value equal to 0.00005 and a q-value equal to 0.03. These genes are listed in above. For each gene, a citation that documents the gene’s role in immunity was listed, where applicable