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Table 4 Genotypes of Enterocytozoon bieneusi characterised by nested PCR-based sequencing of the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA from 25 individual faecal samples from sambar deer collected (in different seasons and years) from five of Melbourne’s water catchment areas

From: First detection and genetic characterisation of Enterocytozoon bieneusi in wild deer in Melbourne’s water catchments in Australia

Genotype designationa GenBank ID Sample code Catchment area Season Year
D MF693831 C1508 Cardinia Spring 2010
D MF693831 UY1357 Upper Yarra Winter 2010
D MF693831 YY4416 Yan Yean Autumn 2014
J MF693833 OS5279 O’Shannassay Spring 2014
Type IV MF693832 OS1917 O’Shannassay Winter 2011
MWC_d1 * MF496204 C1505 Cardinia Spring 2010
MWC_d1 * MF496204 C4255 Cardinia Summer 2014
MWC_d1 * MF496204 C3645 Cardinia Winter 2013
MWC_d1 * MF496204 C4857 Cardinia Winter 2014
MWC_d1 * MF496204 MR7507 Maroondah Autumn 2017
MWC_d1 * MF496204 MR240 Maroondah Winter 2009
MWC_d1 * MF496204 OS4550 O’Shannassay Autumn 2014
MWC_d1 * MF496204 OS7320 O’Shannassay Spring 2016
MWC_d1 * MF496204 UY4661 Upper Yarra Autumn 2014
MWC_d1 * MF496204 UY4607 Upper Yarra Autumn 2014
MWC_d1 * MF496204 UY4646 Upper Yarra Autumn 2014
MWC_d1 * MF496204 UY4614 Upper Yarra Autumn 2014
MWC_d1 * MF496204 UY4624 Upper Yarra Autumn 2014
MWC_d1 * MF496204 UY4067 Upper Yarra Spring 2013
MWC_d1 * MF496204 UY6189 Upper Yarra Spring 2015
MWC_d1 * MF496204 UY6181 Upper Yarra Spring 2015
MWC_d1 * MF496204 UY6540 Upper Yarra Summer 2016
MWC_d1 * MF496204 UY2942 Upper Yarra Winter 2012
MWC_d1 * MF496204 UY6973 Upper Yarra Winter 2016
MWC_d2 * MF496203 C3263 Cardinia Spring 2012
  1. aNovel genotype is indicated with an asterisk