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Table 1 Summary of the RNA-Seq data of both Anisakis simplex (s.s.) and Anisakis pegreffii whole third-stage larvae (WL) and oesophageal-pharyngeal region (PX). For A. pegreffii, assembly and results of bioinformatic analyses and annotation are reported. For both A. simplex and A. pegreffii, upregulated differentially expressed genes (DEGs) are also reported

From: Tissue-specific transcriptomes of Anisakis simplex (sensu stricto) and Anisakis pegreffii reveal potential molecular mechanisms involved in pathogenicity

  WL PX
Anisakis simplex (s.s.)
 Number of reads 32,859,191 37,606,372
 Number of reads mapping against genome 29,557,642 34,029,700
 Number of uniquely mapping 28,085,077 32,380,240
 Number of Mbp 1369 1567
 DEGs 109 226
Anisakis pegreffii
 Number of reads 23,397,005 36,382,470
 Number of Mbp 975 1515
De-novo assembly
 Number of transcripts 21,195a
 Mean length 468
 N50 2063
Annotation
 Number of ORFs 10,424
 Number of transcripts matching available sequences in Nr 7920
 Returning SwissProt 8803
 Gene Ontology 8560
 Kyoto Encyclopoedia of Genes and Genomes 7369
 DEGs 163 339
  1. aTranscripts obtained from pooled reads