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Table 3 Protein families (according to information in the Pfam database) identified amongst the upregulated transcripts in the pharynx (PX) of Anisakis simplex (s.s.) and Anisakis pegreffii. Pfam code and description, relative abundance of transcripts compared to the whole transcriptome (expressed as ratio between relative frequencies) and medial logFC are reported

From: Tissue-specific transcriptomes of Anisakis simplex (sensu stricto) and Anisakis pegreffii reveal potential molecular mechanisms involved in pathogenicity

PFAM PFAM description PX enrichment Median logFC
Anisakis simplex (s.s.)
 PF00188 Cysterin-rich secretory protein 9.71 2.17
 PF01400 Astacin peptidase M12A 16.19 2.15
 PF01431 Peptidase M13 11.88 2.48
 PF01433 Peptidase M1 2.48 2.68
 PF11838 Peptidase active site 17.81 2.68
 PF00450a Peptidase S10 3.23 2.42
 PF01549 ShK toxin 13.36 2.23
 PF00014a Kunitz/Bovine pancreatic trypsin inhibitor domain 4.97 2.65
 PF01683 EB module 18.59 2.55
 PF00031 Cystatin 13.36 2.06
Anisakis pegreffii
 PF00188 Cysterin-rich secretory protein 9.29 3.41
 PF01400 Astacin peptidase M12A 12.62 3.28
 PF01431 Peptidase M13 13.59 3.02
 PF01433 Peptidase M1 5.52 3.66
 PF01549 ShK toxin 8.83 2.75
 PF01683 EB module 58.88 2.98
 PF00063 Myosin head motor domain 11.39 2.71
 PF00031 Cystatin domain (cysteine protease inhibitor) 8.83 2.81
 PF06394 Pepsine inhibitor like 8.03 3.14
 PF14580 Leucine-rich 88.31 4.93
  1. aPfam associated to transcripts detected in AS-PX only