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Table 1 Oligonucleotide sequences of the primers used in this study

From: Anaplasma phagocytophilum in the highly endangered Père David’s deer Elaphurus davidianus

Pathogen

Target gene

Primer

Amplicon size (bp)

References

Primer Name

Oligonucleotide sequence (5′-3′)

A. centrale

16S rRNA

AC1f

CTGCTTTTAATACTGCAGGACTA

426

Kawahara et al., [6]

AC1r

ATGCAGCACCTGTGTGAGGT

A. bovis

16S rRNA

AB1f

CTCGTAGCTTGCTATGAGAAC

551

Kawahara et al., [6]

AB1r

TCTCCCGGACTCCAGTCTG

A. phagocytophilum

16S rRNA

SSAP2f

GCTGAATGTGGGGATAATTTAT

641

Kawahara et al., [6]

SSAP2r

ATGGCTGCTTCCTTTCGGTTA

A. marginale

msp4

Amargmsp4 F

CTGAAGGGGGAGTAATGGG

344

Torina et al., [8]

Amargmsp4 R

GGTAATAGCTGCCAGAGATTCC

A. ovis

msp4

Aovismsp4 F

TGAAGGGAGCGGGGTCATGGG

347

Torina et al., [8]

Aovismsp4 R

GAGTAATTGCAGCCAGGGACTCT

A. platys

16S rRNA

Platys-F

AAGTCGAACGGATTTTTGTC

504

Inokuma et al., [7]

Platys-R

CTTTAACTTACCGAACC