Table 2 List of infected hosts, infected tissues, phylogenetic affinities of the parasites found and GenBank ID. All hosts have wild origin unless indicated otherwise

Diplodus sargus ^a

Intestine

Goussia sp. (Fig. 1, Additional file 1: Figure S1)

MF468321

Sparus aurata ^b

Intestine

Goussia sp. (Fig. 1, Additional file 1: Figure S1)

MF468322

Scomber japonicus

Heart, kidney

Goussia sp. (Fig. 1, Additional file 1: Figure S1)

MF468319, MF468320

Dicentrarchus labrax ^b

Intestine

Goussia sp. (Fig. 1, Additional file 1: Figure S1)

MF468318

Intestine

Eimeria cf. variabilis (Fig. 2, Additional file 2: Figure S2);

Eimeria sp. (Fig. 2, Additional file 2: Figure S2)

MF468291, MF468292

Dicentrarchus labrax

Intestine

Eimeria sp. (Fig. 2, Additional file 2: Figure S2)

MF468293

Trisopterus luscus

Intestine

Eimeria sp. (Fig. 2, Additional file 2: Figure S2)

MF468290

Stomach, gall bladder, liver, heart, spleen, intestine

Eimeriidae gen. sp. (Fig. 2, Additional file 2: Figure S2)

MF468299–MF468308

Trachurus trachurus

Intestine, liver, spleen, stomach

Eimeriidae gen. sp. (Fig. 2, Additional file 2: Figure S2)

MF468309–MF468314

Scyliorhinus canicula

Liver

Eimeriidae gen. sp. (Fig. 2, Additional file 2: Figure S2)

MF468294

Liver

Eimeria sp. (Fig. 2, Additional file 2: Figure S2)

MF468298

Liver, anal gland, stomach

Coccidia sp. (Fig. 3, Additional file 2: Figure S2)

MF468295–MF468297

Pagrus caeruleostictus

Gall bladder, liver, intestine

Calyptospora sp. (Fig. 2, Additional file 2: Figure S2)

MF468315–MF468317

Heart, kidney

Apicomplexa fam. gen. sp. (Fig. 4, Additional file 1: Figure S1)

MF468323, MF468324

Thunnus sp.

Intestine

Eimeriidae gen. sp.

MG724744^c

Solea senegalensis

Testes, liver, gills

Apicomplexa fam. gen. sp. (Fig. 4, Additional file 1: Figure S1)

MF468325–MF468328