Table 1 Differentially expressed (DE) genes in each group comparison, separated according to the direction and magnitude of change
|  | Comparison | DI vs D (n = 2368) | DI vs N (n = 6371) | D vs N (n = 1933) |
|---|---|---|---|---|
Upregulated genes | n (%) | 1388 (58.6) | 2777 (43.6) | 700 (36.2) |
log2FC, mean (min-max) | 0.378 (0.067–2.971) | 0.437 (0.072–2.694) | 0.322 (0.064–1.477) | |
Downregulated genes | n (%) | 980 (41.4) | 3594 (56.4) | 1233 (63.8) |
log2FC, mean (min-max) | −0.346 (− 3.686– −0.065) | −0.294 (− 3.901– −0.054) | −0.230 (−1.436– −0.054) |