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Table 4 Significantly enriched functions in upregulated S. scrofa genes in C. parvum infected cell monolayers

From: Transcriptome analysis of pig intestinal cell monolayers infected with Cryptosporidium parvum asexual stages

Category Term Gene count Fold enrich. Bonferronia Benjaminia FDRa
UP_KEYWORDS Phosphoprotein 54 3.67 7.79E-14 7.79E-14 4.33E-13
GOTERM_MF_DIRECT GO:0044822~poly(A) RNA binding 59 3.24 4.97E-13 4.97E-13 1.71E-12
UP_KEYWORDS Acetylation 39 4.53 2.73E-12 1.36E-12 1.50E-11
UP_KEYWORDS Cytoplasm 40 3.31 2.34E-08 7.80E-09 1.29E-07
GOTERM_CC_DIRECT GO:0070062~extracellular exosome 80 1.93 1.97E-06 1.97E-06 8.38E-06
GOTERM_CC_DIRECT GO:0005737~cytoplasm 97 1.73 6.18E-06 3.09E-06 2.63E-05
GOTERM_CC_DIRECT GO:0005925~focal adhesion 24 3.96 1.23E-05 4.10E-06 5.23E-05
GOTERM_CC_DIRECT GO:0005634~nucleus 94 1.72 1.74E-05 4.36E-06 7.41E-05
UP_KEYWORDS Nucleus 46 2.35 3.27E-05 8.17E-06 1.80E-04
UP_KEYWORDS Ubl conjugation 18 4.82 4.68E-05 9.35E-06 2.57E-04
UP_KEYWORDS Cell cycle 10 8.51 4.86E-04 8.09E-05 0.00267
GOTERM_CC_DIRECT GO:0005654~nucleoplasm 49 2.04 8.31E-04 1.66E-04 0.00353
UP_KEYWORDS Isopeptide bond 13 5.12 0.00198 2.83E-04 0.01090
KEGG_PATHWAY ssc03040: Spliceosome 16 4.00 0.00189 0.00189 0.01135
KEGG_PATHWAY ssc04110: Cell cycle 15 4.21 0.00223 0.00111 0.01335
GOTERM_MF_DIRECT GO:0003723~RNA binding 18 3.49 0.00627 0.00314 0.02160
UP_KEYWORDS Cell division 8 9.46 0.00398 4.98E-04 0.02191
UP_KEYWORDS Glycoprotein 26 2.60 0.00575 6.41E-04 0.03168
GOTERM_CC_DIRECT GO:0005794~Golgi apparatus 25 2.62 0.00957 0.00160 0.04088
  1. aSignificant values are italicized