Skip to main content

Table 4 Significantly enriched functions in upregulated S. scrofa genes in C. parvum infected cell monolayers

From: Transcriptome analysis of pig intestinal cell monolayers infected with Cryptosporidium parvum asexual stages

Category

Term

Gene count

Fold enrich.

Bonferronia

Benjaminia

FDRa

UP_KEYWORDS

Phosphoprotein

54

3.67

7.79E-14

7.79E-14

4.33E-13

GOTERM_MF_DIRECT

GO:0044822~poly(A) RNA binding

59

3.24

4.97E-13

4.97E-13

1.71E-12

UP_KEYWORDS

Acetylation

39

4.53

2.73E-12

1.36E-12

1.50E-11

UP_KEYWORDS

Cytoplasm

40

3.31

2.34E-08

7.80E-09

1.29E-07

GOTERM_CC_DIRECT

GO:0070062~extracellular exosome

80

1.93

1.97E-06

1.97E-06

8.38E-06

GOTERM_CC_DIRECT

GO:0005737~cytoplasm

97

1.73

6.18E-06

3.09E-06

2.63E-05

GOTERM_CC_DIRECT

GO:0005925~focal adhesion

24

3.96

1.23E-05

4.10E-06

5.23E-05

GOTERM_CC_DIRECT

GO:0005634~nucleus

94

1.72

1.74E-05

4.36E-06

7.41E-05

UP_KEYWORDS

Nucleus

46

2.35

3.27E-05

8.17E-06

1.80E-04

UP_KEYWORDS

Ubl conjugation

18

4.82

4.68E-05

9.35E-06

2.57E-04

UP_KEYWORDS

Cell cycle

10

8.51

4.86E-04

8.09E-05

0.00267

GOTERM_CC_DIRECT

GO:0005654~nucleoplasm

49

2.04

8.31E-04

1.66E-04

0.00353

UP_KEYWORDS

Isopeptide bond

13

5.12

0.00198

2.83E-04

0.01090

KEGG_PATHWAY

ssc03040: Spliceosome

16

4.00

0.00189

0.00189

0.01135

KEGG_PATHWAY

ssc04110: Cell cycle

15

4.21

0.00223

0.00111

0.01335

GOTERM_MF_DIRECT

GO:0003723~RNA binding

18

3.49

0.00627

0.00314

0.02160

UP_KEYWORDS

Cell division

8

9.46

0.00398

4.98E-04

0.02191

UP_KEYWORDS

Glycoprotein

26

2.60

0.00575

6.41E-04

0.03168

GOTERM_CC_DIRECT

GO:0005794~Golgi apparatus

25

2.62

0.00957

0.00160

0.04088

  1. aSignificant values are italicized