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Table 3 Occurrence and distribution of subtypes from Enterocytozoon bieneusi ITS genotypes J and BEB4 at four MLST loci

From: Genetic diversity within dominant Enterocytozoon bieneusi genotypes in pre-weaned calves

ITS genotype Farm ID Subtype No. of positive specimens
MS1 MS3 MS4 MS7
J 3 MS1-3n MS3-1 MS4-2 12
MS1-3n MS3-1 MS4-2 MS7-1 10
MS1-3n MS3-1 MS4-1 1
MS1-3n MS3-1 1
MS1-3n MS3-1 MS4-1 MS7-1 1
MS1-3n MS3-1 MS4-2 and MS4-3 1
MS1-3n MS3-2 MS4-1 1
MS1-3n MS3-4n MS4-2 MS7-1 1
MS1-2 MS3-2 MS4-1 1
MS1-2 1
MS1-4n MS3-3n MS4-1 1
MS1-5n MS3-2 MS4-1 MS7-1 1
MS1-5n MS3-5n MS4-1 MS7-1 1
MS1-6n MS3-5n MS4-1 1
MS1-7n MS3-1 MS4-1 1
MS3-1 MS4-2 1
MS3-1 1
MS3-2 MS4-1 1
4 MS1-8n MS4-1 6
MS1-8n MS4-1 MS7-1 4
MS1-8n MS4-1 MS7-2n 1
MS1-8n MS4-1 MS7-4n 1
MS1-8n 1
MS1-7n MS4-1 1
Noisy MS4-1 1
BEB4 1 MS1-1 MS3-2 MS4-2 7
MS1-1 MS3-2 MS4-2 MS7-1 4
MS1-1 MS3-2 MS4-2 MS7-3n 2
MS3-2 MS4-2 1
MS3-2 1
2 MS1-1 MS3-2 MS4-2 MS7-1 1
5 MS1-1 MS3-2 MS4-2 MS7-1 7
MS1-1 MS3-2 MS4-2 7
MS1-1 MS3-2 MS4-2 MS7-3n 1
Total       84
  1. Abbreviation: n novel subtype