Table 1 Gene Ontology term enrichment among genes whose transcripts are affected by exposure to C.sp_P cell-free biofilm supernatant
GO term ID | GO term name | Count | Fold enrichment | BH corrected P-value |
|---|---|---|---|---|
Biological process | ||||
GO:0044712 | Single-organism catabolic process | 30 | 2.35 | 3.72E-03 |
GO:0043436 | Oxoacid metabolic process | 39 | 2.13 | 3.85E-03 |
GO:0042178 | Xenobiotic catabolic process | 10 | 6.20 | 4.30E-03 |
GO:0071466 | Cellular response to xenobiotic stimulus | 10 | 6.20 | 4.30E-03 |
GO:0006805 | Xenobiotic metabolic process | 10 | 6.20 | 4.30E-03 |
GO:0019752 | Carboxylic acid metabolic process | 38 | 2.09 | 4.33E-03 |
GO:0006082 | Organic acid metabolic process | 40 | 2.00 | 4.81E-03 |
GO:0009410 | Response to xenobiotic stimulus | 10 | 5.94 | 5.17E-03 |
GO:0009407 | Toxin catabolic process | 10 | 6.48 | 5.57E-03 |
GO:0090487 | Secondary metabolite catabolic process | 10 | 6.48 | 5.57E-03 |
GO:0017085 | Response to insecticide | 10 | 6.48 | 5.57E-03 |
GO:0009404 | Toxin metabolic process | 10 | 6.48 | 5.57E-03 |
GO:0017143 | Insecticide metabolic process | 10 | 6.48 | 5.57E-03 |
GO:0046701 | Insecticide catabolic process | 10 | 6.48 | 5.57E-03 |
GO:0046680 | Response to DDT | 10 | 6.48 | 5.57E-03 |
GO:0009636 | Response to toxic substance | 11 | 5.81 | 9.92E-03 |
GO:0006334 | Nucleosome assembly | 10 | 4.32 | 4.72E-02 |
Molecular function | ||||
GO:0016705 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 25 | 2.45 | 2.08E-02 |
GO:0004497 | Monooxygenase activity | 21 | 2.62 | 2.47E-02 |
GO:0005506 | Iron ion binding | 25 | 2.50 | 3.08E-02 |
GO:0046906 | Tetrapyrrole binding | 22 | 2.34 | 4.92E-02 |
GO:0020037 | Heme binding | 22 | 2.35 | 5.60E-02 |
Cellular component | ||||
GO:0032993 | Protein-DNA complex | 20 | 6.01 | 2.02E-08 |
GO:0000786 | Nucleosome | 16 | 6.45 | 4.20E-07 |
GO:0044815 | DNA packaging complex | 16 | 5.65 | 2.52E-06 |
GO:0000785 | Chromatin | 20 | 3.98 | 1.35E-05 |
GO:0000790 | Nuclear chromatin | 13 | 5.40 | 8.46E-05 |
GO:0005694 | Chromosome | 29 | 2.48 | 3.21E-04 |
GO:0000788 | Nuclear nucleosome | 6 | 14.12 | 3.70E-04 |
GO:0000228 | Nuclear chromosome | 17 | 3.20 | 1.50E-03 |
GO:0044427 | Chromosomal part | 25 | 2.42 | 1.75E-03 |
GO:0044454 | Nuclear chromosome part | 15 | 3.03 | 7.53E-03 |
GO:0005811 | Lipid particle | 6 | 7.70 | 1.34E-02 |