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Table 2 Primer sequence, repeat motif, no. of alleles, inbreeding coefficient, Hardy-Weinberg test, and neutrality test of each locus

From: Genetic differentiation of the oriental rat flea, Xenopsylla cheopis, from two sympatric host species

Locus

Primer sequence (5'→3')

Repeat motif

No. of alleles

F IS

Hardy-Weinberg test

Neutrality test

Forward

Reverse

H o

H e

P

F o

L95

U95

P5

TATACCAAATTTCACACAGTT

ATATTCTTAGGAATCCCAGTT

(CT)12

4

0.1251

0.4216

0.6197

< 0.0001

0.3834

0.3212

0.9424

P6

TTAATAGGCATATAATTCAAA

GAATTCCCATCACAACCCATA

(CT)10

7

0.3581

0.1863

0.3282

< 0.0001

0.6734

0.2241

0.7653

P12

TGACTTCCGTGTATCACTAAC

CTAAGGACAAATAAATATGCC

(AG)9

6

01829

0.3922

0.6403

< 0.0001

0.3628

0.2389

0.8439

P15

CCATTTTTCGTACCTGCTACC

GTCAAGAAGAGGACTCGCTGA

(TC)5(TC)4

5

0.6273

0.1275

0.4329

< 0.0001

0.5693

0.2786

0.9051

P19

TTGGTGAGATATAAGTGTGTG

CAAGAAATTGATAACATTTTC

(TC)20

12

0.2313

0.5000

0.8154

< 0.0001

0.1886

0.1419

0.5329

P21

GATCAGGTGTTTCGAGTTATC

TTATTATATATGCTCTTGCGC

(CT)13...(TC)6

5

0.3796

0.2647

0.4430

< 0.0001

0.5592

0.2656

0.8964

P24

AAAAATTGTCGAAAGAAGACA

TTAGAGAAATCGTTGAGGAAA

(GT)7

4

-0.1344

0.3824

0.5014

0.0007

0.5011

0.3287

0.9518

P27

TCATACTAAAATTGAAGAAGG

ACGTAAATACGAATCGAACAC

(TG)6

7

-0.2196

0.5588

0.5143

< 0.0001

0.4882

0.2159

0.8001

P29

TGAATTAGAGTTGCCAAACGG

AATTCGCATAACAATCGCCTA

(GT)3...(GT)6

2

0.0855

0.1863

0.2011

0.6090

0.7999

0.5048

0.9902

P33

ATAAGGAAGTAACCAAAAGGG

TCATCAACAATCAAAACGAAG

(TG)6

2

0.0636

0.3137

0.4090

0.0271

0.5930

0.5024

0.9902

P36

GTGAGGTTCAAAGTCGGGTAT

AATAAAAATCGGTTCAGCAGT

(TG)8

7

0.1668

0.4706

0.6047

0.0006

0.3983

0.2155

0.7537

  1. Abbreviations: F IS inbreeding coefficient, H o observed heterozygosity, H e expected heterozygosity, F o observed frequency, L95 95% lower boundary of F o , U95, 95% upper boundary of F o