Target species/gene | Name | Primer/probe | Sequence (5'-3') | Reference |
---|---|---|---|---|
G. salaris/ITS | G.sal208F | Forward | GGTGGTGGCGCACCTATTC | Present study |
G.sal149R | Reverse | ACGATCGTCACTCGGAATCGAT | Present study | |
G.sal188P | Probe | (FAM)CAAGCAGAACTGGTTAAT(MGBNFQ) | Present study | |
G. salaris/ITS | F | Forward | CGATCGTCACTCGGAATCG | Collins et al. [32] |
R | Reverse | GGTGGCGCACCTATTCTACA | Collins et al.[32] | |
Gsal2 | Probe | (FAM)TCTTATTAACCAGTTCTGC(MGBNFQ) | Collins et al. [32] | |
O. mykiss/cytb | RBTF | Forward | AGTCTCTCCCTGTATATCGTC | Wilcox et al. [35] |
RBTR | Reverse | GATTTAGTTCATGAAGTTGCGTGAGTA | Wilcox et al. [35] | |
RBTP | Probe | (FAM)CCAACAACTCTTTAACCATC(MGBNFQ) | Wilcox et al. [35] | |
S. salar/cytb | Salmonid Cyt B FOR | Forward | CGGAGCATCTTTCTTCTTTATCTGT | Matejusova et al. [34] |
S. salar REV | Reverse | ACTCCGATATTTCAGGTTTCTTTATATAGA | Matejusova et al. [34] | |
S. salar Cyt B Probe | Probe | (HEX)CCAACAACTCTTTAACCATC-(MGBNFQ) | Matejusova et al. [34] |