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Table 1 FAIRE DNA elements assessed in D. melanogaster reporter assays

From: Identification of Aedes aegypti cis-regulatory elements that promote gene expression in olfactory receptor neurons of distantly related dipteran insects

FAIRE DNA Elementa

Flanks Gene no.b

Gene TSS

supercont1.174:341062-341799

AAEL005776 (orco c )

supercont1.174:357279

supercont1.1782:38974-39907

AAEL016970 (Or1)

supercont1.1782:39941

supercont1.671:130269-131236

AAEL012254 (Or8)

supercont1.671:131254

supercont1.199:700946-702158

AAEL006301 (fru)

supercont1.199:701824

supercont1.237:1279560-1280173

AAEL007110 (Or16 c )

supercont1.237:1269860

supercont1.160:604315-605761

AAEL005507 (acj6 c )

supercont1.160:435622

supercont1.123:863985-864746

AAEL004572 (E93)

supercont1.123:868,883

supercont1.54:975577-976601

AAEL002359 (onecut)

supercont1.54:924002

  1. aThe FAIRE DNA sequences shown [17] were assessed for their ability to drive EGFP expression in D. melanogaster reporter assays
  2. bThe flanking genes (gene number and name) and transcription start sites (TSSs) of the flanking genes are noted. Sequences correspond to A. aegypti scaffolds reference v.4, which was used in the FAIRE-seq investigation [17]. A subset of these elements (CREs associated with orco, Or1, Or8 and fru) were used for subsequent generation of A. aegypti transgenic strains
  3. cDrosophila reporter lines were initially described in Behura et al. [17] and are characterized in further detail in the present investigation