Pathogen | Primer or probe sequence | Amplified fragment length (bp) | GenBank ID |
---|---|---|---|
ASFV | Forward primer: 5'-AGTTATGGGAAACCCGACCC-3' | 254 | FN557520 |
Reverse primer: Biotin-5'-CCCTGAATCGGAGCATCCT-3' | |||
Capture probe: NH2-C12-5'-AGCCTTATGTTCCAGTAGGGTTTG-3' | |||
RC-probe: Biotin-5'-CAAACCCTACTGGAACATAAGGCT-3' | |||
BTV | Forward primer: 5'-GCAGCATTTTGAGAGAGCGA-3' | 101 | KP 822059.1 |
Reverse primer: Biotin-5'-CCCGATCATACATTGCTTCCT-3' | |||
Capture probe: NH2-C12-5'-GGAGGAGCCGGCGAAAGCATA-3' | |||
RC-probe: Biotin-5'-TATGCTTTCGCCGGCTCCTCC-3' | |||
BB | Forward primer: 5'-AAGAGCAGACGGAACCAGAC-3' | 345 | AY502600 |
Reverse primer: Biotin-5'-GTGCCATTTGAGTCGTATTG-3' | |||
Capture probe: NH2-C12-5'-AATTCAGGCACTTCAACTTTAACAA-3' | |||
RC-probe: Biotin-5'-TTGTTAAAGTTGAAGTGCCTGAATT-3' | |||
EHDV | Forward primer: 5'-TGATTATGATGTTCATGGCGAA-3' | 189 | KU140939.1 |
Reverse primer: Biotin-5'-ACCTTGGAGCTTCACTCTATCT-3' | |||
Capture probe: NH2-C12-5'-TAGATGGATTTGACATACCGCCGGA-3' | |||
RC-probe: Biotin-5'-TCCGGCGGTATGTCAAATCCATCTA-3' | |||
VSV | Forward primer: 5'-TGGACGGGCTTGAAAATCAGTGCAAA-3' | 199 | KP 202364.1 |
Reverse primer: Biotin-5'-TTGAATCTGGAAACAATAGTTCCGTATCT-3' | |||
Capture probe: NH2-C12-5'-ATGTTCTTCCACATGTTCAAAAA-3' | |||
RC-probe: Biotin-5'-TTTTTGAACATGTGGAAGAACAT-3' | |||
WNV | Forward primer: 5'-GAGCCACTCAGGCAGGGAGATTCAG-3' | 496 | KY229074.1 |
Reverse primer: Biotin-5'-AACACCACAGTGCCGTGACCT-3' | |||
Capture probe: NH2-C12-5'-TGAAGGGAACAACCTATGGCGTCTG-3' | |||
RC-probe: Biotin-5'-CAGACGCCATAGGTTGTTCCCTTCA-3' | |||
CB | Forward primer: 5'-TGAGATTCGGGGGTTGTTGC-3' | 376 | M80806 |
Reverse primer: Biotin-5'-ACACCTCCTTATTCCCACTCG-3' | |||
Capture probe: NH2-C12-5'-TTTAACGGCGCTCTCGGTTTATGCG-3' | |||
RC-probe: Biotin-5'-CGCATAAACCGAGAGCGCCGTTAAA-3' | |||
RVFV | Forward primer: 5'-ATGATGACATTAGAAGGGA-3' | 298 | DQ380149 |
Reverse primer: Biotin-5'-ATGCTGGGAAGTGATGAG-3' | |||
Capture probe: NH2-C12-5'-ATGCTGTAGTTCCAAACTCAGCCCT-3' | |||
RC-probe: Biotin-5'-AGGGCTGAGTTTGGAACTACAGCAT-3' | |||
EBV | Forward primer: 5'-CGCTGGCTGGTGTTAATGTAGGG-3' | 249 | KC545392.1 |
Reverse primer: Biotin-5'-ATGCAGTCGTGATGGCTTCGG-3' | |||
Capture probe: NH2-C12-5'-CAGCAAACTAACGCAATGGTAACCT-3' | |||
RC-probe: Biotin-5'-AGGTTACCATTGCGTTAGTTTGCTG-3' | |||
SBV | Forward primer: 5'-GAAGCTAGTGCTCAGATTGTCATGC-3' | 130 | KC545392.1 |
Reverse primer: Biotin-5'-GTGGATAGAAGTCAAAAGCATCAAGG-3' | |||
Capture probe: NH2-C12-5'-AAGGGATGCACCTGGGCCGATGGTTA-3' | |||
RC-probe: Biotin-5'-TAACCATCGGCCCAGGTGCATCCCTT-3' |