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Table 5 16S rRNA and groEL gene sequence variants of A. phagocytophilum in free-living ungulates and engorged ticks

From: Diverse tick-borne microorganisms identified in free-living ungulates in Slovakia

Species/ Isolate code Sex / Age Variant 16S rRNAa Variant groElb
Capreolus capreolus / 18SPZc ♂ /? Y II
Capreolus capreolus / 55SPZ ♂ / 1 year Y II
Cervus elaphus / 19SPZ ♂ / 3 years S I
Cervus elaphus / 21SPZ ♂ / juvenile W I
Dama dama / 25SPZ ♀ / 2 years S I
Dama dama / 51SPZ ♀ / juvenile S I
Ovis musimon / 10SPZ ♂ /? Qe I
Ovis musimon / 63SPZ ♂ / 3 years W I
Sus scrofa / 13SPZ ♂ /? B I
Sus scrofa / 43SPZ ♀ /? B I
I. ricinus larva from C. capreolus / 190KPZd   X na
I. ricinus larva from C. capreolus / 193KPZ   X na
I. ricinus larva from C. capreolus / 236KPZ   X na
I. ricinus larva from D. dama / 129KPZ   S I
I. ricinus larva from D. dama / 158KPZ   W I
I. ricinus larva from D. dama / 180KPZ   S na
I. ricinus larva from D. dama / 268KPZ   B na
I. ricinus larva from D. dama / 382KPZ   B na
  1. aNomenclature according to Schorn et al. [88] and Silaghi et al. [89]
  2. bNomenclature according to Jahfari et al. [20]
  3. cSPZ, spleen from game
  4. dKPZ, ticks from game
  5. eThe sequence did not match with the variants described in Schorn et al. [88] or Silaghi et al. [89] and was submitted to GenBank (accession number MF061301); na, not amplified