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Table 5 16S rRNA and groEL gene sequence variants of A. phagocytophilum in free-living ungulates and engorged ticks

From: Diverse tick-borne microorganisms identified in free-living ungulates in Slovakia

Species/ Isolate code

Sex / Age

Variant 16S rRNAa

Variant groElb

Capreolus capreolus / 18SPZc

♂ /?

Y

II

Capreolus capreolus / 55SPZ

♂ / 1 year

Y

II

Cervus elaphus / 19SPZ

♂ / 3 years

S

I

Cervus elaphus / 21SPZ

♂ / juvenile

W

I

Dama dama / 25SPZ

♀ / 2 years

S

I

Dama dama / 51SPZ

♀ / juvenile

S

I

Ovis musimon / 10SPZ

♂ /?

Qe

I

Ovis musimon / 63SPZ

♂ / 3 years

W

I

Sus scrofa / 13SPZ

♂ /?

B

I

Sus scrofa / 43SPZ

♀ /?

B

I

I. ricinus larva from C. capreolus / 190KPZd

 

X

na

I. ricinus larva from C. capreolus / 193KPZ

 

X

na

I. ricinus larva from C. capreolus / 236KPZ

 

X

na

I. ricinus larva from D. dama / 129KPZ

 

S

I

I. ricinus larva from D. dama / 158KPZ

 

W

I

I. ricinus larva from D. dama / 180KPZ

 

S

na

I. ricinus larva from D. dama / 268KPZ

 

B

na

I. ricinus larva from D. dama / 382KPZ

 

B

na

  1. aNomenclature according to Schorn et al. [88] and Silaghi et al. [89]
  2. bNomenclature according to Jahfari et al. [20]
  3. cSPZ, spleen from game
  4. dKPZ, ticks from game
  5. eThe sequence did not match with the variants described in Schorn et al. [88] or Silaghi et al. [89] and was submitted to GenBank (accession number MF061301); na, not amplified
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Parasites & Vectors

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