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Table 2 Summary information of Trichuris and outgroup species used for molecular identification in the present study

From: Genetic characterisation and phylogenetic status of whipworms (Trichuris spp.) from captive non-human primates in China, determined by nuclear and mitochondrial sequencing

Trichuris species Stages Host species Country Living conditions GenBank ID Reference
ITS cox1   ITS cox1
Trichuris colobae Eggs Colobus monkey Spain Zoo FM991956 Cutillas et al. [11]
Trichuris colobae Eggs Colobus monkey Spain Zoo FM991955 Cutillas et al. [11]
Trichuris discolour Adults Japanese serow Japan In the wild AB367795 Unpublished
Trichuris discolor Adults Bovine Spain Domestication HE608846 Callejón et al. [60]
Trichuris discolor Adults Bovine Iran Domestication FR870273 Callejón et al. [60]
Trichuris discolor Adults Bovine Iran Domestication FR870272 Callejón et al. [60]
Trichuris discolor Adults Bovine Spain Domestication HE608852 Callejón et al. [60]
Trichuris discolor Adults Wild yak China In the wild NC_018596 Liu et al. [27]
Trichuris muris Adults Mouse Japan In the wild AP017703 Unpublished
Trichuris ovis Adults Sheep Ireland Domestication JF680987 Cavallero et al. [42]
Trichuris ovis Adults Sheep Spain Domestication FR870274 Callejón et al. [60]
Trichuris ovis Adults Antelope China Zoo NC_018597 Liu et al. [27]
Trichuris suis Adults Swine China Domestication AM993003 Liu et al. [10]
Trichuris suis Adults Swine China Domestication AM992999 Liu et al. [10]
Trichuris suis Adults Swine China Domestication AM993007 Liu et al. [10]
Trichuris suis Adults Swine China Domestication AM993012 Liu et al. [10]
Trichuris suis Adults Swine China Domestication AM993004 Liu et al. [10]
Trichuris suis Adults Swine Denmark Domestication KT449823 Hawash et al. [28]
Trichuris suis Adults Swine China Domestication GU070737 Liu et al. [13]
Trichuris trichiura Adults Baboon Turkey   Zoo KC877992 Unpublished
Trichuris trichiura Adults Human China   AM992984 Liu et al. [10]
Trichuris trichiura Adults Human China   AM992981 Liu et al. [10]
Trichuris trichiura Adults Human China   AM992997 Liu et al. [10]
Trichuris trichiura Adults Human China   AM992994 Liu et al. [10]
Trichuris trichiura Adults Human China   AM992990 Liu et al. [10]
Trichuris trichiura Adults Human China   AM992991 Liu et al. [10]
Trichuris trichiura Adults Human Cameroon   GQ301555 Ravasi et al. [23]
Trichuris trichiura Adults Human China   GU385218 Liu et al. [13]
Trichuris trichiura Adults Human Japan   AP017704 Unpublished
Trichuris trichiura Adults Human Uganda   KT449826 Hawash et al. [28]
Trichuris sp. Adults Leaf monkey China Zoo KT186233 Liu et al. [27]
Trichuris sp. Adults Leaf monkey China Zoo KT186234 Liu et al. [27]
Trichuris sp. Adults Leaf monkey China Zoo KT186231 Liu et al. [27]
Trichuris sp. Adults Leaf monkey China Zoo KT186232 Liu et al. [27]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336469 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336472 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336467 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336463 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336471 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336464 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336465 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336477 Cavallero et al. [42]
Trichuris sp. Adults Japanese macaque Italy Zoo KP336470 Cavallero et al. [42]
Trichuris sp. Adults Chacma baboon South Africa In the wild GQ301551 Ravasi et al. [23]
Trichuris sp. Adults Chacma baboon South Africa In the wild GQ301552 Ravasi et al. [23]
Trichuris sp. Adults Chacma baboon South Africa In the wild GQ301553 Ravasi et al. [23]
Trichuris sp. Adults Vervet monkey Italy Zoo KP336481 Cavallero et al. [42]
Trichuris sp. Adults Vervet monkey Italy Zoo KP336483 Cavallero et al. [42]
Trichuris sp. Adults Vervet monkey Italy Zoo KP336484 Cavallero et al. [42]
Trichuris sp. Adults Golden snub-nosed monkey China Zoo KT344825 This study
Trichuris sp. Adults Anubis baboon China Zoo KT344826, MH390359-MH390361 This study
Trichuris sp. Adults Vervet monkey China Zoo KT344827, MH390370 This study
churis sp. Adults Northern pig-tailed macaque China Zoo KT344828, MH390364, MH390365 This study
Trichuris sp. Adult Rhesus monkey China Zoo KT344829, MH390367-MH390369 This study
Trichuris sp. Adults Northern white-cheeked gibbon China Zoo KT344830, MH390366 This study
Trichuris sp. Adults Hamadryas baboon China Zoo KT344831, MH390363 This study
Trichuris sp. Eggs Black snub-nosed monkey China Zoo KT344832, MH390362 This study
Trichuris sp. Adults Olive baboon USA Laboratory KT449825 Hawash et al. [28]
Trichuris sp. Adults Hamadryas baboon Denmark Zoo KT449824 Hawash et al. [28]
Trichuris sp. Adults Golden snub-nosed monkey China Zoo KT344817 This study
Trichuris sp. Adults Anubis baboon China Zoo KT344818, This study
  MH390703-MH390705
Trichuris sp. Adults Vervet monkey China Zoo KT344819, MH390714 This study
Trichuris sp. Adults Northern pig-tailed macaque China Zoo KT344820, MH390708 This study
MH390709
Trichuris sp. Adults Rhesus monkey China Zoo KT344821, This study
MH390711-MH390713
Trichuris sp. Adults Northern white-cheeked gibbon China Zoo KT344822, MH390710 This study
Trichuris sp. Adults Hamadryas baboon China Zoo KT344823, MH390707 This study
Trichuris sp. Eggs Black snub-nosed monkey China Zoo KT344824, MH390706 This study
Outgroups         
Trichinella spiralis Larvae American black bear USA In the wild KC006432 Unpublished
Trichinella spiralis Larvae Rat USA Laboratory AF293969 Lavrov & Brown [40]
Trichinella britovi Larvae Mouse Italy Laboratory KM357413 Mohandas et al. [41]