Table 2 Summary information of Trichuris and outgroup species used for molecular identification in the present study
Trichuris species | Stages | Host species | Country | Living conditions | GenBank ID | Reference | ||
|---|---|---|---|---|---|---|---|---|
ITS | cox1 | Â | ITS | cox1 | ||||
Trichuris colobae | Eggs | Colobus monkey | Spain | – | Zoo | FM991956 | – | Cutillas et al. [11] |
Trichuris colobae | Eggs | Colobus monkey | Spain | – | Zoo | FM991955 | – | Cutillas et al. [11] |
Trichuris discolour | Adults | Japanese serow | Japan | – | In the wild | AB367795 | – | Unpublished |
Trichuris discolor | Adults | Bovine | Spain | – | Domestication | HE608846 | – | Callejón et al. [60] |
Trichuris discolor | Adults | Bovine | Iran | – | Domestication | FR870273 | – | Callejón et al. [60] |
Trichuris discolor | Adults | Bovine | Iran | – | Domestication | FR870272 | – | Callejón et al. [60] |
Trichuris discolor | Adults | Bovine | Spain | – | Domestication | HE608852 | – | Callejón et al. [60] |
Trichuris discolor | Adults | Wild yak | – | China | In the wild | – | NC_018596 | Liu et al. [27] |
Trichuris muris | Adults | Mouse | – | Japan | In the wild | – | AP017703 | Unpublished |
Trichuris ovis | Adults | Sheep | Ireland | – | Domestication | JF680987 | – | Cavallero et al. [42] |
Trichuris ovis | Adults | Sheep | Spain | – | Domestication | FR870274 | – | Callejón et al. [60] |
Trichuris ovis | Adults | Antelope | – | China | Zoo | – | NC_018597 | Liu et al. [27] |
Trichuris suis | Adults | Swine | China | – | Domestication | AM993003 | – | Liu et al. [10] |
Trichuris suis | Adults | Swine | China | – | Domestication | AM992999 | – | Liu et al. [10] |
Trichuris suis | Adults | Swine | China | – | Domestication | AM993007 | – | Liu et al. [10] |
Trichuris suis | Adults | Swine | China | – | Domestication | AM993012 | – | Liu et al. [10] |
Trichuris suis | Adults | Swine | China | – | Domestication | AM993004 | – | Liu et al. [10] |
Trichuris suis | Adults | Swine | – | Denmark | Domestication | – | KT449823 | Hawash et al. [28] |
Trichuris suis | Adults | Swine | – | China | Domestication | – | GU070737 | Liu et al. [13] |
Trichuris trichiura | Adults | Baboon | Turkey |  | Zoo | KC877992 | – | Unpublished |
Trichuris trichiura | Adults | Human | China | – |  | AM992984 | – | Liu et al. [10] |
Trichuris trichiura | Adults | Human | China | – |  | AM992981 | – | Liu et al. [10] |
Trichuris trichiura | Adults | Human | China | – |  | AM992997 | – | Liu et al. [10] |
Trichuris trichiura | Adults | Human | China | – |  | AM992994 | – | Liu et al. [10] |
Trichuris trichiura | Adults | Human | China | – |  | AM992990 | – | Liu et al. [10] |
Trichuris trichiura | Adults | Human | China | – |  | AM992991 | – | Liu et al. [10] |
Trichuris trichiura | Adults | Human | Cameroon | – |  | GQ301555 | – | Ravasi et al. [23] |
Trichuris trichiura | Adults | Human | – | China |  | – | GU385218 | Liu et al. [13] |
Trichuris trichiura | Adults | Human | – | Japan |  | – | AP017704 | Unpublished |
Trichuris trichiura | Adults | Human | – | Uganda |  | – | KT449826 | Hawash et al. [28] |
Trichuris sp. | Adults | Leaf monkey | China | – | Zoo | KT186233 | – | Liu et al. [27] |
Trichuris sp. | Adults | Leaf monkey | China | – | Zoo | KT186234 | – | Liu et al. [27] |
Trichuris sp. | Adults | Leaf monkey | China | – | Zoo | KT186231 | – | Liu et al. [27] |
Trichuris sp. | Adults | Leaf monkey | China | – | Zoo | KT186232 | – | Liu et al. [27] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336469 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336472 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336467 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336463 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336471 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336464 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336465 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336477 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Japanese macaque | Italy | – | Zoo | KP336470 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Chacma baboon | South Africa | – | In the wild | GQ301551 | – | Ravasi et al. [23] |
Trichuris sp. | Adults | Chacma baboon | South Africa | – | In the wild | GQ301552 | – | Ravasi et al. [23] |
Trichuris sp. | Adults | Chacma baboon | South Africa | – | In the wild | GQ301553 | – | Ravasi et al. [23] |
Trichuris sp. | Adults | Vervet monkey | Italy | – | Zoo | KP336481 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Vervet monkey | Italy | – | Zoo | KP336483 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Vervet monkey | Italy | – | Zoo | KP336484 | – | Cavallero et al. [42] |
Trichuris sp. | Adults | Golden snub-nosed monkey | China | – | Zoo | KT344825 | – | This study |
Trichuris sp. | Adults | Anubis baboon | China | – | Zoo | KT344826, MH390359-MH390361 | – | This study |
Trichuris sp. | Adults | Vervet monkey | China | – | Zoo | KT344827, MH390370 | – | This study |
churis sp. | Adults | Northern pig-tailed macaque | China | – | Zoo | KT344828, MH390364, MH390365 | – | This study |
Trichuris sp. | Adult | Rhesus monkey | China | – | Zoo | KT344829, MH390367-MH390369 | – | This study |
Trichuris sp. | Adults | Northern white-cheeked gibbon | China | – | Zoo | KT344830, MH390366 | – | This study |
Trichuris sp. | Adults | Hamadryas baboon | China | – | Zoo | KT344831, MH390363 | – | This study |
Trichuris sp. | Eggs | Black snub-nosed monkey | China | – | Zoo | KT344832, MH390362 | – | This study |
Trichuris sp. | Adults | Olive baboon | – | USA | Laboratory | – | KT449825 | Hawash et al. [28] |
Trichuris sp. | Adults | Hamadryas baboon | – | Denmark | Zoo | – | KT449824 | Hawash et al. [28] |
Trichuris sp. | Adults | Golden snub-nosed monkey | – | China | Zoo | – | KT344817 | This study |
Trichuris sp. | Adults | Anubis baboon | – | China | Zoo | – | KT344818, | This study |
| Â | MH390703-MH390705 | |||||||
Trichuris sp. | Adults | Vervet monkey | – | China | Zoo | – | KT344819, MH390714 | This study |
Trichuris sp. | Adults | Northern pig-tailed macaque | – | China | Zoo | – | KT344820, MH390708 | This study |
MH390709 | ||||||||
Trichuris sp. | Adults | Rhesus monkey | – | China | Zoo | – | KT344821, | This study |
MH390711-MH390713 | ||||||||
Trichuris sp. | Adults | Northern white-cheeked gibbon | – | China | Zoo | – | KT344822, MH390710 | This study |
Trichuris sp. | Adults | Hamadryas baboon | – | China | Zoo | – | KT344823, MH390707 | This study |
Trichuris sp. | Eggs | Black snub-nosed monkey | – | China | Zoo | – | KT344824, MH390706 | This study |
Outgroups | Â | Â | Â | Â | Â | Â | Â | Â |
Trichinella spiralis | Larvae | American black bear | USA | – | In the wild | KC006432 | – | Unpublished |
Trichinella spiralis | Larvae | Rat | – | USA | Laboratory | – | AF293969 | Lavrov & Brown [40] |
Trichinella britovi | Larvae | Mouse | – | Italy | Laboratory | – | KM357413 | Mohandas et al. [41] |