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Table 5 Polymorphisms in mitochondrial isocitrate dehydrogenase (icd)

From: Exploiting genetic polymorphisms in metabolic enzymes for rapid screening of Leishmania infantum genotypes

Zymodeme

Strain/isolate

GenBank ID

150

204

369

1038

MON-1

MHOM/FR/78/LEM75

DQ449672.1

G

T

T

C

MON-1

MHOM/ES/1986/BCN16

DQ449676.1

.

.

.

.

MON-1

MHOM/FR/1997/LSL29

DQ449675.1

.

.

.

.

MON-1

MHOM/ES/1993/PM1

DQ449674.1

.

.

.

.

MON-1

MHOM/FR/1995/LPN114

DQ449673.1|

.

.

.

.

MON-1

MHOM/PT/2000/IMT260

DQ449677.1

.

.

.

.

MON-1

MHOM/TN/1980/IPT1

MF347625

.

.

.

MON-1

MHOM/FR/78/LEM75

MF347626

.

.

.

MON-1

Isolate 31u

MF347627

.

.

.

MON-1

Isolate 49u

MF347628

.

.

.

MON-1

Isolate 791

MF347629

.

.

.

MON-1

Isolate 10816

MF347630

.

.

.

MON-1

Isolate V2921

MF347631

.

.

.

MON-11

MHOM/FR/1980/LEM189

DQ449685.1

.

.

C

.

MON-24

MHOM/DZ/82/LIPA59

MF347632

.

C

C

MON-29

MHOM/ES/82/BCN1

MF347633

.

.

.

MON-29

MHOM/FR/1996/LEM3249

DQ449678.1

.

.

C

.

MON-72

MHOM/IT/86/ISS218

MF347634

.

.

.

MON-78

MHOM/MT/1985/BUCK

DQ449686.1

.

.

C

.

MON-81

MHOM/SD/1962/3Sa

DQ449689.1

A

.

C

.

MON-183

MHOM/ES/1991/LEM2298

DQ449679.1

.

.

.

.

MON-188

MHOM/IT/1993/ISS800

DQ449693.1

.

.

C

.

MON-198

MHOM/ES/1988/LLM175

DQ449690.1

.

.

.

.

MON-199

MHOM/ES/1992/LLM373

DQ449691.1

.

.

.

.

MON-201

MHOM/IT/93/ISS822

MF347635

.

.

.

MON-228

MHOM/IT/1994/ISS1036

DQ449692.1

.

.

C

.

MON-267

MHOM/SD/1997/LEM3472a

DQ449694.1

A

.

C

A

MON-309

ITOB/TR/2005/CUK2

EU545241.1

.

.

C

.

MON-309

MHOM/TR/2005/CUK1

EU545240.1

.

.

C

.

ni

ITOB/TR/2007/CUK10

EU545242.1

.

.

C

.

non-MON-1

MHOM/TR/2000/OG-VL

EU545243.1

.

.

.

.

ni

ni

DQ449698.1

.

.

.

.

  1. Zymodeme sequences obtained in this study are in bold
  2. Abbreviation: ni not indicated
  3. Key: . consensus sequence, – sequence not available
  4. aInitially assigned to L. infantum and successively designated L. donovani [18]