Skip to main content

Table 5 Polymorphisms in mitochondrial isocitrate dehydrogenase (icd)

From: Exploiting genetic polymorphisms in metabolic enzymes for rapid screening of Leishmania infantum genotypes

Zymodeme Strain/isolate GenBank ID 150 204 369 1038
MON-1 MHOM/FR/78/LEM75 DQ449672.1 G T T C
MON-1 MHOM/ES/1986/BCN16 DQ449676.1 . . . .
MON-1 MHOM/FR/1997/LSL29 DQ449675.1 . . . .
MON-1 MHOM/ES/1993/PM1 DQ449674.1 . . . .
MON-1 MHOM/FR/1995/LPN114 DQ449673.1| . . . .
MON-1 MHOM/PT/2000/IMT260 DQ449677.1 . . . .
MON-1 MHOM/TN/1980/IPT1 MF347625 . . .
MON-1 MHOM/FR/78/LEM75 MF347626 . . .
MON-1 Isolate 31u MF347627 . . .
MON-1 Isolate 49u MF347628 . . .
MON-1 Isolate 791 MF347629 . . .
MON-1 Isolate 10816 MF347630 . . .
MON-1 Isolate V2921 MF347631 . . .
MON-11 MHOM/FR/1980/LEM189 DQ449685.1 . . C .
MON-24 MHOM/DZ/82/LIPA59 MF347632 . C C
MON-29 MHOM/ES/82/BCN1 MF347633 . . .
MON-29 MHOM/FR/1996/LEM3249 DQ449678.1 . . C .
MON-72 MHOM/IT/86/ISS218 MF347634 . . .
MON-78 MHOM/MT/1985/BUCK DQ449686.1 . . C .
MON-81 MHOM/SD/1962/3Sa DQ449689.1 A . C .
MON-183 MHOM/ES/1991/LEM2298 DQ449679.1 . . . .
MON-188 MHOM/IT/1993/ISS800 DQ449693.1 . . C .
MON-198 MHOM/ES/1988/LLM175 DQ449690.1 . . . .
MON-199 MHOM/ES/1992/LLM373 DQ449691.1 . . . .
MON-201 MHOM/IT/93/ISS822 MF347635 . . .
MON-228 MHOM/IT/1994/ISS1036 DQ449692.1 . . C .
MON-267 MHOM/SD/1997/LEM3472a DQ449694.1 A . C A
MON-309 ITOB/TR/2005/CUK2 EU545241.1 . . C .
MON-309 MHOM/TR/2005/CUK1 EU545240.1 . . C .
ni ITOB/TR/2007/CUK10 EU545242.1 . . C .
non-MON-1 MHOM/TR/2000/OG-VL EU545243.1 . . . .
ni ni DQ449698.1 . . . .
  1. Zymodeme sequences obtained in this study are in bold
  2. Abbreviation: ni not indicated
  3. Key: . consensus sequence, – sequence not available
  4. aInitially assigned to L. infantum and successively designated L. donovani [18]