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Table 7 Polymorphisms in glucose-6-phosphate dehydrogenase (g6pdh)

From: Exploiting genetic polymorphisms in metabolic enzymes for rapid screening of Leishmania infantum genotypes

Zymodeme

Strain/isolate

GenBank ID

45

315

348

359

403

468

690

1191

MON-1

MHOM/FR/78/LEM75

DQ449770.1

T

C

T

A

G

T

C

C

MON-1

MHOM/PT/2000/IMT260

DQ449775.1

.

.

.

.

.

.

.

.

MON-1

MHOM/ES/1986/BCN16

DQ449774.1

.

.

.

.

.

.

.

.

MON-1

MHOM/FR/1997/LSL29

DQ449773.1

.

.

.

W

.

.

.

.

MON-1

MHOM/ES/1993/PM1

DQ449772.1

.

.

.

.

.

.

.

.

MON-1

MHOM/FR/1995/LPN114

DQ449771.1

.

.

.

.

.

.

.

.

MON-1

MHOM/BL/67/ITMAP263

KU175220.1

.

.

.

.

.

.

.

MON-1

MHOM/TN/80/IPT1

MF479731

.

.

.

.

.

.

.

MON-1

MHOM/FR/78/LEM75

MF479732

.

.

.

MON-1

Isolate 49u

MF479733

.

.

.

.

.

.

.

MON-1

Isolate 31U

MF479734

.

.

.

.

MON-1

Isolate 791

MF479735

.

.

.

.

.

.

.

MON-1

Isolate 10816

MF479736

.

.

.

.

.

.

.

MON-1

Isolate V2921

MF479737

.

.

.

.

.

.

.

MON-11

MHOM/FR/1980/LEM189

DQ449783.1

C

.

.

T

.

.

.

.

MON-24

MHOM/DZ/82/LIPA59

MF479738

C

.

.

.

.

.

.

MON-29

MHOM/ES/82/BCN1

MF479739

C

.

.

T

.

.

.

MON-29

MHOM/FR/1996/LEM3249

DQ449776.1

C

.

.

W

.

.

.

MON-72

MHOM/IT/86/ISS218

MF479740

.

.

.

.

.

.

.

MON-77

MCAM/ES/86/LEM935

DQ449797.1

.

.

.

W

.

.

.

MON-78

MHOM/MT/1985/BUCK

DQ449784.1

C

.

.

.

.

.

.

.

MON-81

MHOM/SD/1962/3Sa

DQ449787.1

C

G

C

.

.

.

T

T

MON 105

MHOM/ES/2001/LLM1026

DQ449799.1

.

.

.

.

.

.

.

.

MON-183

MHOM/ES/1991/LEM2298

DQ449777.1

.

.

.

W

.

.

.

.

MON-188

MHOM/IT/1993/ISS800

DQ449791.1

C

.

.

.

.

.

.

.

MON-198

MHOM/ES/1988/LLM175

DQ449788.1

C

.

.

T

.

.

.

.

MON-199

MHOM/ES/1992/LLM373

DQ449789.1

.

.

.

W

.

.

.

.

MON-201

MHOM/IT/93/ISS822

MF479741

.

.

.

.

.

.

.

.

MON-228

MHOM/IT/1994/ISS1036

DQ449790.1

.

.

.

.

.

.

.

.

MON-253

MHOM/ES/1996/LLM580

DQ449798.1

.

.

.

.

A

.

.

.

MON-267

MHOM/SD/1997/LEM3472a

DQ449792.1

C

G

C

.

.

.

T

T

MON-267

MCAN/SD/2000/LEM3988

KU175214.1

G

C

.

.

.

T

.

MON-309

ITOB/TR/2005/CUK2

EU545237.1

C

.

.

.

.

.

.

.

MON-309

MHOM/TR/2005/CUK1

EU545236.1

C

.

.

.

.

.

.

.

ni

ITOB/TR/2007/CUK10

EU545238.1

C

.

.

.

.

.

.

.

ni

MHOM/CN/93/KXG-XU

JX021334.1

.

C

.

.

C

.

.

ni

MHOM/CN/94/KXG-LIU

JX021333.1

.

C

.

.

C

.

.

non-MON-1

MHOM/TR/2000/OG-VL

EU545239.1

.

.

.

.

.

.

.

.

ni

Isolate RRR-B

DQ449796.1

.

.

.

.

.

.

.

.

ni

MHOM/PA/78/WR285

KU175216.1

.

.

.

.

.

.

.

ni

Isolate D38

KU175221.1

.

.

.

.

.

.

.

ni

Isolate D33

KU175219.1

.

.

.

.

.

.

.

ni

Isolate D36D

KU175218.1

.

.

.

.

.

.

.

ni

Isolate E9D

KU175217.1

.

.

.

.

.

.

.

ni

JPCM5

XM_001468358.1

.

.

.

.

.

.

.

.

  1. Zymodeme sequences obtained in this study are in bold
  2. Abbreviation: ni not indicated
  3. Key: . consensus sequence, – sequence not available
  4. aInitially assigned to L. infantum and successively designated L. donovani [18]