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Table 3 Intra-individual pairwise nucleotide distances (%) of the ITS1 sequences of Spirocerca spp.

From: Phylogenetic analysis of Spirocerca lupi and Spirocerca vulpis reveal high genetic diversity and intra-individual variation

Specimen

No. of sequences analyzed

Median (third interquartile range)

Minimal variation

Maximal variation

S. lupi

    

A

10

0.37 (0.36–0.38)

0.37

0.71

B

10

0.37 (0.36–0.38)

0.37

0.71

C

9

0.73 (0.72–0.74)

0.37

1.42

D

11

0.73 (0.71–0.75)

0.37

2.85

Ea

8

0.37 (0.30–0.44)

0.73

1.78

F

7

0.37 (0.30–0.44)

0.37

0.71

G

10

0.73 (0.72–0.74)

0.37

1.42

H

8

0.73 (0.72–0.74)

0.37

1.42

I

10

0.74 (0.73–0.75)

0.37

1.07

J

8

0.73 (0.723–0.80)

0.37

1.07

K

8

0.73 (0.72–0.74)

0.37

0.71

L

7

0.73 (0.71–0.75)

0.37

2.17

M

10

0.37 (0.36–0.38)

0.37

1.07

Na

9

0

–

0.71

Oa

7

0

–

0.71

Pa

8

0

–

0.71

Q

8

0.37 (0.36–0.38)

0.37

0.71

V

11

0.73 (0.72–0.74)

0.37

1.78

W

5

1.10 (1.08–1.12)

0.37

1.78

R

12

0.55 (0.54–0.56)

0.37

1.43

AA

10

0.74 (0.73–0.75)

0.37

1.79

BA

10

1.10 (1.08–1.12)

0.37

2.14

CA

8

1.47 (1.45–1.49)

0.37

1.43

DA

6

1.10 (1.08–1.12)

0.37

2.14

S. vulpis

    

S

10

0.37 (0.36–0.38)

0.37

1.80

Ta

3

0.37 (0.36–0.38)

0.37

0.72

U

7

0.73 (0.72–0.74)

0.37

1.42

X

11

0.37 (0.36–0.38)

0.37

1.42

EA

7

0.37 (0.36–0.38)

0.37

1.07

FA

6

0.37 (0.36–0.38)

0.37

0.72

GA

10

0.37 (0.36–0.38)

0.37

1.08

  1. aAll sequences of the specimen, except for one, were identical to each other