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Table 1 Specimens used in this study and their genotypes obtained by melt curve analysis of mitochondrial qPCR products

From: Mitochondrial genome sequence variation as a useful marker for assessing genetic heterogeneity among Cyclospora cayetanensis isolates and source-tracking

Genotype

PCR product size (bp)

No. of 15-bp repeats

No. of specimens

Source of specimens

Ct value (mean ± SD)

Tm value (mean ± SD)

CM-1

312

1

1

China, Kaifeng

31.23

78.32

CM-2

312

1

19

China, Zhengzhou

26.99 ± 2.87

78.10 ± 0.24

CM-3

357

4

6

Peru

26.38 ± 1.73

75.86 ± 0.22

CM-4

372

5

2

Peru

26.40 ± 1.73

75.43 ± 0.07

CM-5

342

3

1

Nepal

24.64

76.89

CM-6

342

3

2

Nepal

27.15 ± 282

76.22 ± 0.06

CM-7

327

2

2

Indonesia

25.64 ± 4.57

77.19 ± 0.78

CM-8

357

4

1

Guatemala

31.23

75.81

CM-9

357

4

1

Spain

22.35

75.95

Uninterpretable sequence

na

na

1

China, Zhengzhou

29.28

77.34

  1. Abbreviation: na not available