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Table 2 Intra-genotypic nucleotide substitutions in the triosephosphate isomerase (tpi), glutamate dehydrogenase (gdh) and β-giardin (bg) genes of Giardia duodenalis in crab-eating macaques in Hainan, China
| tpi | gdh | bg | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Subtype (n) | GenBank ID | Nucleotide at position | Subtype (n) | GenBank ID | Nucleotide at position | Subtype (n) | GenBank ID | Nucleotide at position | |||||||||||||||||||||||
| Ref. sequence | MF095053 | 25 | 28 | 67 | 181 | 190 | 196 | 247 | 256 | 331 | 340 | 499 | Ref. sequence | KM190707 | 297 | 561 | 666 | 681 | 786 | 793 | 876 | Ref. sequence | KY696837 | 91 | 195 | 211 | 226 | 276 | 311 | 352 | 391 |
| A | T | C | G | T | A | G | C | G | G | G | C | T | T | C | C | G | G | A | A | T | T | A | A | C | A | ||||||
| B-sh01 (108) | JX994245 | B-VANC/96/UBC/127 (162) | KM190707 | B-CD10 (171) | KY696837 | ||||||||||||||||||||||||||
| B1 (75) | KC441076 | T | C | B-VANC/87/UBC/8 (40) | KM190714 | C | A | B2 (59) | KC441079 | G | C | T | |||||||||||||||||||
| B6 (27) | GU564284 | G | B-VANC/91/UBC/67 (9) | KM190708 | T | A | B-Egyh8 (58) | MG736242 | G | C | |||||||||||||||||||||
| B2 (17) | KC441077 | G | C | A | BIV (7) | KF679733 | C | B-VANC/91/UBC/67 (5) | KM190799 | G | |||||||||||||||||||||
| B-hn01 (13)a | MK262843 | A | A | B-Afu97 (5) | HM134210 | C | T | A | B-hn06a (1) | MK282648 | G | G | |||||||||||||||||||
| B-hn02 (78)a | MK262844 | A | B-sh03 (2) | JX994233 | T | C | B-hn07a (1) | MK282649 | G | ||||||||||||||||||||||
| B-hn03a (12) | MK282645 | T | B-hn05a (15) | MK282647 | C | A | A | B-hn08a (20) | MK282650 | G | G | C | G | ||||||||||||||||||
| B-hn04 (32)a | MK282646 | A | |||||||||||||||||||||||||||||
