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Table 2 Intra-genotypic nucleotide substitutions in the triosephosphate isomerase (tpi), glutamate dehydrogenase (gdh) and β-giardin (bg) genes of Giardia duodenalis in crab-eating macaques in Hainan, China

From: Genotypes and public health potential of Enterocytozoon bieneusi and Giardia duodenalis in crab-eating macaques

tpi gdh bg
Subtype (n) GenBank ID Nucleotide at position Subtype (n) GenBank ID Nucleotide at position Subtype (n) GenBank ID Nucleotide at position
Ref. sequence MF095053 25 28 67 181 190 196 247 256 331 340 499 Ref. sequence KM190707 297 561 666 681 786 793 876 Ref. sequence KY696837 91 195 211 226 276 311 352 391
A T C G T A G C G G G C T T C C G G A A T T A A C A
B-sh01 (108) JX994245             B-VANC/96/UBC/127 (162) KM190707         B-CD10 (171) KY696837         
B1 (75) KC441076    T   C        B-VANC/87/UBC/8 (40) KM190714   C     A   B2 (59) KC441079 G    C    T  
B6 (27) GU564284       G       B-VANC/91/UBC/67 (9) KM190708      T A   B-Egyh8 (58) MG736242 G    C     
B2 (17) KC441077 G C      A      BIV (7) KF679733   C       B-VANC/91/UBC/67 (5) KM190799 G        
B-hn01 (13)a MK262843     A       A   B-Afu97 (5) HM134210   C   T   A   B-hn06a (1) MK282648      G G   
B-hn02 (78)a MK262844          A    B-sh03 (2) JX994233 T   C      B-hn07a (1) MK282649   G       
B-hn03a (12) MK282645         T     B-hn05a (15) MK282647   C     A A B-hn08a (20) MK282650 G   G C     G
B-hn04 (32)a MK282646            A                    
  1. aNew subtype identified in this study