Target organism/gene | Primers and probes | Sequence (5′-3′) | Reference |
---|---|---|---|
Rickettsia sp./gltA | CS-F | TCGCAAATGTTCACGGTACTTT | [33] |
CS-R | TCGTGCATTTCTTTCCATTGTG | ||
CS-P | FAM-TGCAATAGCAAGAACCGTAGGCTGGATG-BHQ | ||
R. slovaca/ompB | Rslo351F | CAGGTCAAGGTATTACTAATGCAC | [34] |
Rslo479R | CACCGAAGTCTATGCTTCCTACAC | ||
RsloP | FAM-TGTAATAATGGTGCTGCTATTGG –TAMRA | ||
R. raoultii/ ompB | Rraou2850F2 | GTGGTGGTGTTCCTAATACTCC | [34] |
Rraou2956R2 | ACCTAAGTTGTTATAGTCTGTAGTAAAC | ||
Rrao2896P | 6-FAM-CGCGATATTGGCACTGTACAGT TAAAGCATCGCG-TAMRA | ||
Babesia sp./18S rRNA | BJ1 | GTCTTGTAATTGGAATGATGG | [35] |
BN2 | TAGTTTATGGTTAGGACTACG | ||
Coxiella burnetii/16S rRNA | CbP1 | GGGAAACTCGGGCTAATACC | [36] |
CbP2 | CACGAGGTCCGAAGATCC | ||
CbP | FAM-CCCGCTTTGCTCCAAAGAGATTATG-TAMRA |