From: Tick mitochondrial genomes: structural characteristics and phylogenetic implications
Species | Mitochondrial genome base content | PCGs base content | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Length | A + T (%) | A | T | AT-skew | G | C | GC-skew | Length | A + T (%) | A | T | AT-skew | G | C | GC-skew | |
Nuttalliella namaqua | 14,425 | 78.59 | 5864 | 5472 | 0.035 | 1097 | 1992 | − 0.290 | 10,792 | 78.64 | 3756 | 4731 | − 0.115 | 1150 | 1155 | − 0.002 |
Argas africolumbae | 14,440 | 73.35 | 5579 | 5013 | 0.053 | 1311 | 2537 | − 0.319 | 10,951 | 72.64 | 3327 | 4628 | − 0.164 | 1408 | 1588 | − 0.060 |
Argas boueti | 14,307 | 76.63 | 5768 | 5196 | 0.052 | 1152 | 2191 | − 0.311 | 10,830 | 76.24 | 3660 | 4597 | − 0.113 | 1214 | 1359 | − 0.056 |
Argas brumpti | 14,516 | 69.91 | 5094 | 5054 | 0.004 | 1326 | 3042 | − 0.393 | 10,834 | 68.42 | 2926 | 4487 | − 0.211 | 1571 | 1850 | − 0.082 |
Argas lagenoplastis | 14,478 | 72.64 | 5594 | 4923 | 0.064 | 1340 | 2621 | − 0.323 | 10,864 | 71.76 | 3267 | 4529 | − 0.162 | 1478 | 1590 | − 0.037 |
Argas miniatus | 14,416 | 74.16 | 5452 | 5239 | 0.020 | 1252 | 2473 | − 0.328 | 10,820 | 73.56 | 3248 | 4711 | − 0.184 | 1428 | 1433 | − 0.002 |
Argas persicus | 14,411 | 72.72 | 5427 | 5053 | 0.036 | 1264 | 2667 | − 0.357 | 10,866 | 71.83 | 3217 | 4588 | − 0.176 | 1502 | 1559 | − 0.019 |
Argas striatus | 14,485 | 76.22 | 5739 | 5302 | 0.040 | 1167 | 2277 | − 0.322 | 10,844 | 75.89 | 3455 | 4774 | − 0.160 | 1266 | 1349 | − 0.032 |
Argas walkerae | 14,437 | 74.36 | 5488 | 5247 | 0.022 | 1213 | 2489 | − 0.345 | 10,865 | 73.65 | 3313 | 4689 | − 0.172 | 1377 | 1486 | − 0.038 |
Antricola mexicanus | 14,415 | 74.60 | 5706 | 5047 | 0.061 | 1242 | 2418 | − 0.321 | 10,813 | 73.80 | 3547 | 4433 | − 0.111 | 1422 | 1410 | 0.004 |
Carios capensis | 14,418 | 73.54 | 5491 | 5112 | 0.036 | 1195 | 2620 | − 0.374 | 10,875 | 72.66 | 3389 | 4513 | − 0.142 | 1406 | 1567 | − 0.054 |
Carios faini | 14,433 | 76.68 | 5902 | 5165 | 0.067 | 1096 | 2270 | − 0.349 | 10,883 | 75.97 | 3677 | 4591 | − 0.111 | 1259 | 1356 | − 0.037 |
Ornithodoros brasiliensis | 14,489 | 73.16 | 5653 | 4947 | 0.067 | 1251 | 2638 | − 0.357 | 10,843 | 72.24 | 3371 | 4462 | − 0.139 | 1442 | 1568 | − 0.042 |
Ornithodoros compactus | 14,400 | 72.14 | 5530 | 4858 | 0.065 | 1265 | 2747 | − 0.369 | 10,890 | 71.21 | 3335 | 4420 | − 0.140 | 1557 | 1578 | − 0.007 |
Ornithodoros coriaceus | 14,423 | 69.75 | 5468 | 4592 | 0.087 | 1295 | 3068 | − 0.406 | 10,917 | 67.90 | 3192 | 4221 | − 0.139 | 1585 | 1919 | − 0.095 |
Ornithodoros costalis | 14,442 | 72.32 | 5343 | 5101 | 0.023 | 1285 | 2713 | − 0.357 | 10,903 | 71.26 | 3277 | 4493 | − 0.156 | 1460 | 1673 | − 0.068 |
Ornithodoros hermsi | 14,430 | 71.97 | 5368 | 5017 | 0.034 | 1348 | 2697 | − 0.333 | 10,913 | 71.05 | 3306 | 4448 | − 0.147 | 1520 | 1639 | − 0.038 |
Ornithodoros moubata | 14,398 | 72.26 | 5548 | 4856 | 0.067 | 1240 | 2754 | − 0.379 | 10,885 | 71.36 | 3344 | 4423 | − 0.139 | 1542 | 1576 | − 0.011 |
Ornithodoros parkeri | 14,437 | 74.45 | 5724 | 5024 | 0.065 | 1262 | 2427 | − 0.316 | 10,868 | 73.94 | 3450 | 4586 | − 0.141 | 1427 | 1405 | 0.008 |
Ornithodoros porcinus | 14,378 | 70.98 | 5405 | 4801 | 0.059 | 1346 | 2826 | − 0.355 | 10,876 | 70.11 | 3251 | 4374 | − 0.147 | 1625 | 1626 | 0.000 |
Ornithodoros rostratus | 14,452 | 72.96 | 5533 | 5011 | 0.050 | 1304 | 2604 | − 0.333 | 10,836 | 72.16 | 3393 | 4426 | − 0.132 | 1445 | 1572 | − 0.042 |
Ornithodoros savignyi | 14,401 | 65.23 | 5461 | 3933 | 0.163 | 1263 | 3744 | − 0.496 | 10,889 | 63.59 | 3054 | 3870 | − 0.118 | 1807 | 2158 | − 0.089 |
Ornithodoros sonrai | 14,430 | 74.02 | 5383 | 5298 | 0.008 | 1249 | 2500 | − 0.334 | 10,866 | 73.23 | 3300 | 4657 | − 0.171 | 1413 | 1496 | − 0.029 |
Ornithodoros tholozani | 14,407 | 69.34 | 5138 | 4852 | 0.029 | 1425 | 2992 | − 0.355 | 10,880 | 67.87 | 3135 | 4249 | − 0.151 | 1618 | 1878 | − 0.074 |
Ornithodoros turicata | 14,458 | 73.27 | 5653 | 4941 | 0.067 | 1325 | 2539 | − 0.314 | 10,868 | 72.41 | 3398 | 4472 | − 0.136 | 1461 | 1537 | − 0.025 |
Ornithodoros zumpti | 14,438 | 69.61 | 5063 | 4988 | 0.007 | 1452 | 2935 | − 0.338 | 10,856 | 68.38 | 3129 | 4294 | − 0.157 | 1635 | 1798 | − 0.047 |
Otobius megnini | 14,430 | 74.85 | 5609 | 5192 | 0.039 | 1172 | 2457 | − 0.354 | 10,821 | 73.83 | 3408 | 4581 | − 0.147 | 1355 | 1477 | − 0.043 |
Nothoaspis amazoniensis | 14,416 | 72.93 | 5671 | 4842 | 0.079 | 1172 | 2731 | − 0.399 | 10,851 | 71.86 | 3488 | 4309 | − 0.105 | 1447 | 1607 | − 0.052 |
Ixodes hexagonus | 14,539 | 72.66 | 5457 | 5107 | 0.033 | 1260 | 2715 | − 0.366 | 10,826 | 71.13 | 3235 | 4465 | − 0.160 | 1428 | 1698 | − 0.086 |
Ixodes holocyclus | 15,007 | 77.38 | 5728 | 5884 | − 0.013 | 1266 | 2129 | − 0.254 | 10,862 | 76.39 | 3524 | 4773 | − 0.151 | 1305 | 1260 | 0.018 |
Ixodes pavlovskyi | 14,575 | 78.09 | 5529 | 5852 | − 0.028 | 1177 | 2017 | − 0.263 | 10,888 | 77.24 | 3509 | 4901 | − 0.166 | 1224 | 1254 | − 0.012 |
Ixodes persulcatus | 14,539 | 77.35 | 5496 | 5750 | − 0.023 | 1202 | 2091 | − 0.270 | 10,769 | 76.63 | 3456 | 4796 | − 0.162 | 1217 | 1300 | − 0.033 |
Ixodes ricinus | 14,566 | 78.66 | 5594 | 5864 | − 0.024 | 1147 | 1961 | − 0.262 | 10,813 | 77.99 | 3537 | 4896 | − 0.161 | 1155 | 1225 | − 0.029 |
Ixodes tasmani | 15,227 | 77.92 | 5936 | 5929 | 0.001 | 1200 | 2162 | − 0.286 | 10,765 | 77.14 | 3549 | 4755 | − 0.145 | 1207 | 1254 | − 0.019 |
Ixodes uriae | 15,053 | 74.79 | 5667 | 5591 | 0.007 | 1275 | 2520 | − 0.328 | 10,837 | 73.75 | 3439 | 4553 | − 0.139 | 1386 | 1459 | − 0.026 |
Amblyomma americanum | 14,709 | 76.78 | 5478 | 5816 | − 0.030 | 1458 | 1957 | − 0.146 | 10,811 | 76.68 | 3544 | 4746 | − 0.145 | 1190 | 1331 | − 0.056 |
Amblyomma cajennense | 14,780 | 75.96 | 5444 | 5783 | − 0.030 | 1488 | 2064 | − 0.162 | 10,840 | 75.60 | 3468 | 4727 | − 0.154 | 1251 | 1394 | − 0.054 |
Amblyomma elaphense | 14,627 | 80.45 | 5696 | 6072 | − 0.032 | 1234 | 1625 | − 0.137 | 10,815 | 80.46 | 3737 | 4965 | − 0.141 | 1016 | 1097 | − 0.038 |
Amblyomma fimbriatum | 14,705 | 77.67 | 5601 | 5820 | − 0.019 | 1385 | 1899 | − 0.157 | 10,874 | 77.19 | 3600 | 4794 | − 0.142 | 1155 | 1325 | − 0.069 |
Amblyomma sculptum | 14,780 | 76.10 | 5454 | 5794 | − 0.030 | 1482 | 2050 | − 0.161 | 10,840 | 75.80 | 3477 | 4740 | − 0.154 | 1243 | 1380 | − 0.052 |
Amblyomma sphenodonti | 14,772 | 77.78 | 5585 | 5905 | − 0.028 | 1438 | 1844 | − 0.124 | 10,874 | 77.67 | 3595 | 4851 | − 0.149 | 1169 | 1259 | − 0.037 |
Amblyomma triguttatum | 14,740 | 78.40 | 5653 | 5903 | − 0.022 | 1381 | 1803 | − 0.133 | 10,876 | 78.29 | 3607 | 4908 | − 0.153 | 1098 | 1263 | − 0.070 |
Rhipicephalus australis | 14,891 | 79.89 | 5789 | 6108 | − 0.027 | 1307 | 1686 | − 0.127 | 10,828 | 79.72 | 3739 | 4893 | − 0.134 | 1037 | 1159 | − 0.056 |
Rhipicephalus geigyi | 14,948 | 80.37 | 5886 | 6127 | − 0.020 | 1293 | 1642 | − 0.119 | 10,831 | 80.47 | 3828 | 4888 | − 0.122 | 1023 | 1092 | − 0.033 |
Rhipicephalus microplus | 15,167 | 79.73 | 5888 | 6204 | − 0.026 | 1376 | 1698 | − 0.105 | 10,824 | 79.31 | 3711 | 4873 | − 0.135 | 1074 | 1165 | − 0.041 |
Rhipicephalus sanguineus | 14,714 | 77.36 | 5545 | 5838 | − 0.026 | 1478 | 1853 | − 0.113 | 10,814 | 77.42 | 3641 | 4731 | − 0.130 | 1119 | 1323 | − 0.084 |
Rhipicephalus turanicus | 14,717 | 77.81 | 5561 | 5890 | − 0.029 | 1452 | 1814 | − 0.111 | 10,811 | 77.88 | 3666 | 4754 | − 0.129 | 1108 | 1283 | − 0.073 |
Rhipicentor nuttalli | 14,779 | 78.27 | 5581 | 5987 | − 0.035 | 1380 | 1831 | − 0.140 | 10,797 | 78.22 | 3598 | 4847 | − 0.148 | 1090 | 1262 | − 0.073 |
Dermacentor everestianus | 15,191 | 78.80 | 5806 | 6165 | − 0.030 | 1436 | 1784 | − 0.108 | 10,520 | 78.33 | 3459 | 4781 | − 0.160 | 1124 | 1151 | − 0.012 |
Dermacentor nitens | 14,839 | 77.42 | 5640 | 5849 | − 0.018 | 1410 | 1940 | − 0.158 | 10,520 | 77.16 | 3439 | 4678 | − 0.153 | 1166 | 1237 | − 0.030 |
Dermacentor nuttalli | 15,086 | 78.93 | 5871 | 6036 | − 0.014 | 1324 | 1855 | − 0.167 | 10,877 | 78.80 | 3709 | 4862 | − 0.135 | 1073 | 1223 | − 0.065 |
Dermacentor silvarum | 14,945 | 78.78 | 5812 | 5961 | − 0.013 | 1336 | 1836 | − 0.158 | 10,844 | 78.67 | 3680 | 4851 | − 0.137 | 1077 | 1236 | − 0.069 |
Bothriocroton concolor | 14,809 | 75.14 | 5443 | 5685 | − 0.022 | 1607 | 2704 | − 0.254 | 10,910 | 74.44 | 3495 | 4626 | − 0.139 | 1313 | 1476 | − 0.058 |
Bothriocroton undatum | 14,769 | 76.90 | 5464 | 5893 | − 0.038 | 1540 | 1872 | − 0.097 | 10,895 | 76.10 | 3546 | 4745 | − 0.145 | 1237 | 1367 | − 0.050 |
Haemaphysalis bancrofti | 14,673 | 78.35 | 5687 | 5810 | − 0.011 | 1381 | 1795 | − 0.130 | 10,819 | 78.38 | 3712 | 4768 | − 0.125 | 1137 | 1202 | − 0.028 |
Haemaphysalis concinna | 14,675 | 77.98 | 5665 | 5778 | − 0.010 | 1350 | 1879 | − 0.164 | 10,856 | 77.92 | 3692 | 4767 | − 0.127 | 1129 | 1268 | − 0.058 |
Haemaphysalis flava | 14,689 | 76.88 | 5541 | 5752 | − 0.019 | 1498 | 1898 | − 0.118 | 10,824 | 76.62 | 3601 | 4692 | − 0.132 | 1213 | 1318 | − 0.041 |
Haemaphysalis formosensis | 14,676 | 78.29 | 5667 | 5823 | − 0.014 | 1369 | 1817 | − 0.141 | 10,833 | 78.20 | 3703 | 4768 | − 0.126 | 1130 | 1232 | − 0.043 |
Haemaphysalis hystricis | 14,716 | 77.22 | 5646 | 5718 | − 0.006 | 1448 | 1904 | − 0.136 | 10,820 | 76.77 | 3592 | 4714 | − 0.135 | 1187 | 1327 | − 0.056 |
Haemaphysalis japonica | 14,685 | 77.58 | 5605 | 5788 | − 0.016 | 1435 | 1845 | − 0.125 | 10,833 | 77.60 | 3656 | 4750 | − 0.130 | 1149 | 1278 | − 0.053 |
Haemaphysalis longicornis | 14,718 | 77.16 | 5618 | 5738 | − 0.011 | 1440 | 1922 | − 0.143 | 10,795 | 76.79 | 3595 | 4695 | − 0.133 | 1190 | 1315 | − 0.050 |
Haemaphysalis parva | 14,846 | 78.82 | 5806 | 5896 | − 0.008 | 1342 | 1802 | − 0.146 | 10,822 | 78.76 | 3685 | 4838 | − 0.135 | 1088 | 1211 | − 0.054 |
Hyalomma asiaticum | 14,720 | 78.18 | 5600 | 5908 | − 0.027 | 1374 | 1838 | − 0.144 | 10,913 | 78.04 | 3663 | 4853 | − 0.140 | 1116 | 1281 | − 0.069 |