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Table 2 Codon usage analysis of PCGs in the mitochondrial genome of Benedenia humboldti n. sp. from the South-East Pacific

From: The complete mitochondrial genome and description of a new cryptic species of Benedenia Diesing, 1858 (Monogenea: Capsalidae), a major pathogen infecting the yellowtail kingfish Seriola lalandi Valenciennes in the South-East Pacific

AA Codon n Frequency/1000 Fraction AA Codon N Frequency/1000 Fraction
Ala GCG 1 0.31 0.01 Pro CCG 2 0.62 0.02
  GCA 12 3.71 0.13   CCA 8 2.47 0.10
  GCT 73 22.57 0.78   CCT 53 16.39 0.65
  GCC 8 2.47 0.09   CCC 18 5.57 0.22
Cys TGT 78 24.12 0.86 Gln CAG 12 3.71 0.33
  TGC 13 4.02 0.14   CAA 24 7.42 0.67
Asp GAT 43 13.30 0.80 Arg CGG 9 2.78 0.19
  GAC 11 3.40 0.20   CGA 9 2.78 0.19
Glu GAG 27 8.35 0.44   CGT 28 8.66 0.60
  GAA 35 10.82 0.56   CGC 1 0.31 0.02
Phe TTT 354 109.46 0.93 Ser AGG 21 6.49 0.06
  TTC 26 8.04 0.07   AGA 41 12.68 0.12
Gly GGG 28 8.66 0.16   AGT 103 31.85 0.30
  GGA 20 6.18 0.12   AGC 14 4.33 0.04
  GGT 110 34.01 0.64   TCG 4 1.24 0.01
  GGC 14 4.33 0.08   TCA 18 5.57 0.05
His CAT 40 12.37 0.69   TCT 125 38.65 0.37
  CAC 18 5.57 0.31   TCC 16 4.95 0.05
Ile ATA 124 38.34 0.39 Thr ACG 5 1.55 0.04
  ATT 172 53.18 0.54   ACA 25 7.73 0.21
  ATC 20 6.18 0.06   ACT 78 24.12 0.65
Lys AAG 51 15.77 1.00   ACC 12 3.71 0.10
Leu TTG 79 24.43 0.15 Val GTG 49 15.15 0.20
  TTA 311 96.17 0.58   GTA 82 25.36 0.33
  CTG 19 5.88 0.04   GTT 111 34.32 0.44
  CTA 42 12.99 0.08   GTC 8 2.47 0.03
  CTT 67 20.72 0.13 Trp TGG 35 10.82 0.49
  CTC 14 4.33 0.03   TGA 36 11.13 0.51
Met ATG 65 20.10 1.00 Tyr TAT 153 47.31 0.79
Asn AAA 92 28.45 0.45   TAC 41 12.68 0.21
  AAT 94 29.07 0.46 Stop TAG 6 1.86 0.50
  AAC 20 6.18 0.10   TAA 6 1.86 0.50