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Table 1 Forward and reverse primer sequences used for the amplification of Hematodinium by PCR. Each PCR run included initial denaturation and final extension steps, according to the first and final temperatures, respectively, noted in the thermocycler settings

From: Spatial and temporal disease dynamics of the parasite Hematodinium sp. in shore crabs, Carcinus maenas

Primers

Thermocycler settings

Amplicon size (bp)

References

Direction

Name

Sequence (5′–3′)

Final concentration (µM)

Temperature (°C)

Time

No. of cycles

Forward

Hemat-F-1487

CCTGGCTCGATAGAGTTG

0.5

94

10 min

30

187

[57]

Reverse

Hemat-R- 1654

GGCTGCCGTCCGAATTATTCAC

94

15 s

54

15 s

72

30 s

72

10 min

Forward

18SF2

CAGTTTCTGGAAGTGGCAGCTG

1

94

1 min

35

480

[58, 59]

Reverse

Hem3R

TAACCCGAGCCGAGGCATTCA

94

1 min

58

1 min

72

1 min

72

10 min

Forward

18SF2

CAGTTTCTGGAAGTGGCAGCTG

0.5

94

1 min

35

380

[58]

Reverse

ITS R1

GAAGGGAAGGGGAGAAGAAGC

94

30 s

57

1 min

72

1 min

72

7 min