Feature/Index | cox1 (1620Â bp) | nad1 (894 bp) | nad5 (1569 bp) | cox1-nad1-nad5 (4083 bp) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Sheep | Goats | Overall | Sheep | Goats | Overall | Sheep | Goats | Overall | Sheep | Goats | Overall | |
No. of isolates | 6 | 18 | 24 | 8 | 21 | 29 | 8 | 19 | 27 | 6 | 16 | 22 |
No. of mutations | 5 | 21 | 24 | 3 | 24 | 24 | 1 | 33 | 33 | 9 | 68 | 75 |
Parsimony informative sites | 5 | 11 | 15 | 3 | 15 | 18 | 1 | 12 | 12 | 9 | 37 | 44 |
No. of haplotypes | 2 | 9 | 10 | 2 | 10 | 10 | 2 | 8 | 9 | 2 | 7 | 9 |
Haplotype diversity (Hd) | 0.600 | 0.889 | 0.906 | 0.536 | 0.867 | 0.867 | 0.536 | 0.766 | 0.835 | 0.600 | 0.858 | 0.900 |
Nucleotide diversity (Ï€) | 0.00185 | 0.00260 | 0.00264 | 0.00180 | 0.00729 | 0.00628 | 0.00034 | 0.00353 | 0.00270 | 0.00132 | 0.00401 | 0.00358 |
Tajima’s D (P-value) | 2.07077* | − 1.21615 | − 1.23884 | 1.60077 | − 0.23673 | − 0.42079 | 1.16650 | − 1.64663 | − 1.87248* | 2.20374* | − 0.85760 | − 1.15691 |
Fu’s Fs | 4.007* | − 0.956 | − 0.786 | 2.988* | 0.199 | 0.771 | 0.866 | 0.934 | 0.266 | 5.778* | 5.873* | 4.945* |