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Table 3 Echinococcus multilocularis and E. granulosus haplotypes from North-Khorasan Province, northeastern Iran, and origins of sequences used for concatenation (cox1 + nad1) in phylogenetic analyses (Fig. 2)

From: Echinococcus multilocularis and Echinococcus granulosus in canines in North-Khorasan Province, northeastern Iran, identified using morphology and genetic characterization of mitochondrial DNA

Representative haplotypes, genotypes and speciesHostcox1 (GenBank ID)nad1 (GenBank ID)Reference
E.gKh63Jackalscox1-1 (KT697626)snad1-1 (KT697629)This study
E.gKh75Dogscox1-2 (KT033487)snad1-1 (KT033488)This study
E.gKh77Dogscox1-1 (KX186686)snad1-1 KX186689)This study
E.gKh86Wolfscox1-1 (KT697627)snad1-1 (KT697630)This study
E.gKh87Dogscox1-1 (KT697628)snad1-1 (KT697631)This study
E.gKh90Jackalscox1-1 (KX186687)snad1-1 KX186690)This study
E.gKh96Dogscox1-1 (KX186688)snad1-1(KX186691)This study
E.mKh2Foxscox1-3 (KT318127)snad1-2(KT318129)This study
E.mKh4Jackalscox1-3 (KT033486)snad1-3 KT033489)This study
E.mKh11Foxscox1-3 (KT318128)snad1-2 (KT318130)This study
E.mKh20Jackalscox1-3 (KX186692)snad1-2(KX186699)This study
E.mKh22Jackalscox1-3 (KX186693)snad1-2 KX186700)This study
E.mKh30Jackalscox1-3 (KX186694)snad1-2 KX186701)This study
E.mKh41Jackalscox1-3 (KX186695)snad1-2 KX186702)This study
E.mKh47Jackalscox1-3 (KX186696)snad1-2(KX186703)This study
E.mKh55Jackalscox1-3 (KX186697)snad1-2(KX186704)This study
E.mKh81Jackalscox1-3 (KX186698)snad1-2(KX186705)This study
Echinococcus genotypes/species
 G1aSheepnaAJ237632[12, 13]
 G1bSheepAF297617AF297617[69]
 G2SheepM84662AJ237633[12, 13]
 G3aBuffaloM84663AJ237634[12, 13]
 G3bSheepDQ856466DQ856469[70]
 G4HorseM84664AJ237635[12, 13]
 G5CattleM84665AJ237636[12, 13]
 G6aCamelM84666AJ237637[12, 13]
 G6bCamelNC-011121NC-011121[67]
 G7aPigM84667AJ237638[12, 13]
 G7bGoatDQ856468DQ856471[70]
 G8MooseAB235848AB235848[67]
 G10ReindeerAF525457AF525297[71]
 E. felidisLionEF558356EF558357[66]
 E. multilocularisaHumanM84668AJ237639[12, 13]
 E. multilocularisbRodentM84669AJ237640[12, 13]
 E. shiquiqusPikaAB208064AB208064[67]
 E. vogeliRodentM84670AJ237641[12, 13]
 E. oligarthrusRodentM84671AJ237642[12, 13]
Outgroup
 T. saginataCattlenaAJ239106[72, 73]
  1. a, bRelated to Fig. 7
  2. Note: Representative haplotypes used in the phylogenetic analysis are indicated in bold
  3. Abbreviation: na, not available