| Representative haplotypes, genotypes and species | Host | cox1 (GenBank ID) | nad1 (GenBank ID) | Reference |
|---|
| E.gKh63 | Jackal | scox1-1 (KT697626) | snad1-1 (KT697629) | This study |
| E.gKh75 | Dog | scox1-2 (KT033487) | snad1-1 (KT033488) | This study |
| E.gKh77 | Dog | scox1-1 (KX186686) | snad1-1 KX186689) | This study |
| E.gKh86 | Wolf | scox1-1 (KT697627) | snad1-1 (KT697630) | This study |
| E.gKh87 | Dog | scox1-1 (KT697628) | snad1-1 (KT697631) | This study |
| E.gKh90 | Jackal | scox1-1 (KX186687) | snad1-1 KX186690) | This study |
| E.gKh96 | Dog | scox1-1 (KX186688) | snad1-1(KX186691) | This study |
| E.mKh2 | Fox | scox1-3 (KT318127) | snad1-2(KT318129) | This study |
| E.mKh4 | Jackal | scox1-3 (KT033486) | snad1-3 KT033489) | This study |
| E.mKh11 | Fox | scox1-3 (KT318128) | snad1-2 (KT318130) | This study |
| E.mKh20 | Jackal | scox1-3 (KX186692) | snad1-2(KX186699) | This study |
| E.mKh22 | Jackal | scox1-3 (KX186693) | snad1-2 KX186700) | This study |
| E.mKh30 | Jackal | scox1-3 (KX186694) | snad1-2 KX186701) | This study |
| E.mKh41 | Jackal | scox1-3 (KX186695) | snad1-2 KX186702) | This study |
| E.mKh47 | Jackal | scox1-3 (KX186696) | snad1-2(KX186703) | This study |
| E.mKh55 | Jackal | scox1-3 (KX186697) | snad1-2(KX186704) | This study |
| E.mKh81 | Jackal | scox1-3 (KX186698) | snad1-2(KX186705) | This study |
| Echinococcus genotypes/species |
| G1a | Sheep | na | AJ237632 | [12, 13] |
| G1b | Sheep | AF297617 | AF297617 | [69] |
| G2 | Sheep | M84662 | AJ237633 | [12, 13] |
| G3a | Buffalo | M84663 | AJ237634 | [12, 13] |
| G3b | Sheep | DQ856466 | DQ856469 | [70] |
| G4 | Horse | M84664 | AJ237635 | [12, 13] |
| G5 | Cattle | M84665 | AJ237636 | [12, 13] |
| G6a | Camel | M84666 | AJ237637 | [12, 13] |
| G6b | Camel | NC-011121 | NC-011121 | [67] |
| G7a | Pig | M84667 | AJ237638 | [12, 13] |
| G7b | Goat | DQ856468 | DQ856471 | [70] |
| G8 | Moose | AB235848 | AB235848 | [67] |
| G10 | Reindeer | AF525457 | AF525297 | [71] |
| E. felidis | Lion | EF558356 | EF558357 | [66] |
| E. multilocularisa | Human | M84668 | AJ237639 | [12, 13] |
| E. multilocularisb | Rodent | M84669 | AJ237640 | [12, 13] |
| E. shiquiqus | Pika | AB208064 | AB208064 | [67] |
| E. vogeli | Rodent | M84670 | AJ237641 | [12, 13] |
| E. oligarthrus | Rodent | M84671 | AJ237642 | [12, 13] |
| Outgroup |
| T. saginata | Cattle | na | AJ239106 | [72, 73] |
- a, bRelated to Fig. 7
- Note: Representative haplotypes used in the phylogenetic analysis are indicated in bold
- Abbreviation: na, not available
