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Table 5 Results of linkage disequilibrium analysis of allelic profile data

From: Multilocus sequence typing of Enterocytozoon bieneusi in crab-eating macaques (Macaca fascicularis) in Hainan, China

Populationa

n

H

ISA

PMC

VD

L

VD > L

All

33

0.6042 ± 0.1024

0.0781

< 0.001

1.0253

0.9422

Y

SP 1

5

0.5600 ± 0.1600

0.0432

0.487

0.8444

1.1362

N

SP 2

9

0.4667 ± 0.1325

− 0.0741

0.908

0.6286

1.3191

N

SP 3

15

0.4549 ± 0.1400

0.0126

0.604

0.8904

1.0392

N

SP 4

4

0.3200 ± 0.1497

− 0.0590

1.000

0.4889

1.0765

N

Type IV

18

0.5020 ± 0.1542

0.0394

0.319

0.8962

0.9065

N

Macaque3

7

0.4476 ± 0.1425

0.0484

0.365

0.9905

1.2423

N

Peru8

8

0.4786 ± 0.1497

0.0820

0.044

1.0622

1.1025

N

  1. aConsidering each group of isolates with the same multilocus genotype (MLG) as one individual
  2. Abbreviations: n, number of isolates; H, mean genetic diversity; ISA, standardized index of association calculated using the program LIAN 3.7; PMC, significance for obtaining this value in 1000 simulations using the Monte Carlo method; VD, variance of pairwise differences; L, 95% critical value for VD; VD > L indicates linkage disequilibrium; Y, yes; N, no
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