Skip to main content

Table 1 Sequence statistics for four gene fragments used to reconstruct the phylogeny of the Obsoletus/Scoticus complex

From: The tree that hides the forest: cryptic diversity and phylogenetic relationships in the Palaearctic vector Obsoletus/Scoticus Complex (Diptera: Ceratopogonidae) at the European level

Dataset

n

Length (bp)

S

C+G (%)

h

Hd (SD)

π (SD)

Nucleotide model (under BIC)

Implemented model (BI)

cox1 (1)

3763

512–627

141

34.5

228

0.890 (0.003)

0.06299 (0.00473)

  

cox1 (2)

95

528–623

146

33.7

77

0.994 (0.003)

0.0921 (0.00489)

TPM2uf+I+G

nst = 6; rates = invgamma

16S rDNA

95

263

51

15.8

13

0.851 (0.02)

0.04791 (0.00446)

HKY+G

nst = 2; rates = gamma

28S rDNA

95

576

25

39.8

24

0.911 (0.015)

0.00753 (0.00099)

HKY+I

nst = 2; rates = propinv

Concatened genes

95

731

197

32.8

90

0.998 (0.002)

0.04594 (0.00297)

TPM2uf+I+G

nst = 6; rates = invgamma

  1. Abbreviations: n, number of individuals; h, number of haplotypes; Hd, haplotype (gene) diversity; π, nucleotide diversity; S, number of polymorphic sites; SD, standard deviation; bp, base pairs; BIC, Bayesian information criterion; BI, Bayesian inference