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Table 4 Highest-ranking transcripts of the read mapping counts matrix in each of the five stage-specific assemblies

From: Catalogue of stage-specific transcripts in Ixodes ricinus and their potential functions during the tick life-cycle

Contig ID

Best blast hit

Description

Egg

 c77007_g1

EEC13590.1

Conserved hypothetical protein

 c80053_g1

EEC03440.1

Hypothetical protein IscW_ISCW003437

 c80189_g5

A0A147BJ18 (IPR000859)

Putative conserved protein (CUB domain profile)

  c77756_g1

EEC05138.1

Unknown IscW_ISCW005232

 c76180_g1

EEC15123.1(GO:0006508; GO:0008234; IPR000169)

Cathepsin-like protease (proteolysis; cysteine-type peptidase activity; eukaryotic thiol (cysteine) proteases asparagine active site)

Larva

 c73350_g2

XP_029826130.1 (PR01217)

Loricrin-like (LOC115311581) (proline-rich extensin signature)

 c72525_g1

XP_029826132.1 (PR01228)

Glycine-rich cell wall structural protein 1.8-like (eggshell protein signature)

 c82554_g1

EEC03354.1 (GO:0016747; IPR002656)

Conserved unknown (transferase activity, transferring acyl groups other than amino-acyl groups; acyltransferase family)

 c72929_g1

EEC07345.1

Secreted protein

 c69133_g1

EEC18324.1

Secreted protein

Fed nymph

 c23277_g1

JAA67414.1, A0A0K8RAB4 (PR01217)

Putative glycine rich protein (proline-rich extensin signature)

 c80070_g2

V5I1K9

Putative salivary secreted protein of 21.3 kDa (fragment)

 c78019_g4

EEC02888.1 (GO:0042302; IPR000618)

Cuticle protein (structural constituent of cuticle; chitin-binding type R&R domain profile; insect cuticle protein)

 c81210_g1

Q9GP09

Unknown

 c75846_g6

EEC18809.1 (PR01217)

Unknown IscW_ISCW023478 (proline-rich extensin signature)

Female

 c69267_g3

A0A0K8RIE7 (AAY66590.1)

Putative wc protein, secreted protein

 c79150_g3

EEC14461.1

Unknown IscW_ISCW021550

 c75091_g1

EEC18324.1

Secreted protein

 c69267_g2

A0A0K8RB73 (AAY66559.1)

Putative wc protein, secreted salivary protein

 c1565_g1

AAY66620.1, A0A0K8RG69

Secreted protein

Fed female

 c79317_g2

EEC18889.1 (GO:0005319; GO:0006869; IPR001747; IPR001846)

Vitellogenin (lipid transporter activity; lipid transport; VWFD domain profile; von Willebrand factor type D domain; vitellogenin domain profile)

 c79647_g1

EEC14155.1 (GO:0042302; IPR000618)

Cuticle protein (structural constituent of cuticle; Chitin-binding type R&R domain profile; insect cuticle protein)

 c73798_g1

V5I261 (GO:0030682; GO:0043176; IPR002970)

Putative lipocal-1 1 lipocalin (Fragment) (evasion or tolerance of host defenses; amine binding; tick histamine binding protein)

 c80433_g1

A0A147BKD0 (GO:0005319; GO:0006869; IPR001747; IPR001846)

Putative vitellogenin 2 (Fragment) (lipid transporter activity; lipid transport; VWFD domain profile; von Willebrand factor type D domain; vitellogenin domain profile)

 c74644_g1

A0A0K8RN13 (GO:0042302; IPR000618)

Putative cuticle protein (fragment) (structural constituent of cuticle; chitin-binding type R&R domain profile; insect cuticle protein)

  1. Notes: Accession numbers of the best blast hits and their description are supplied. GO term and/or IPS annotations including their respective descriptions are also listed when available