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Table 2 Gene annotation and arrangement in the mitochondrial genome of Hoplolaimus columbus from South Carolina, USA

From: The complete mitochondrial genome of the Columbia lance nematode, Hoplolaimus columbus, a major agricultural pathogen in North America

Name

Type

Start

Stop

Length

Start codon

Stop codon

Direction

Anticodon

Intergenic space

cox1

Protein

1

1536

1536

TTA

TAG

Forward

 

116

atp6

Protein

1551

2192

642

ATT

TAG

Forward

 

14

nad5

Protein

2248

3788

1541

TTA

TT

Forward

 

55

trnD

tRNA

3789

3858

70

  

Forward

GUC

0

nad2

Protein

3859

4650

792

TTA

TAG

Forward

 

0

trnI

tRNA

4715

4770

56

  

Forward

GAU

64

cox3

Protein

4766

5533

768

TTA

TAA

Forward

 

− 5

trnF

tRNA

5941

6009

69

  

Forward

GAA

407

nad4

Protein

6232

7476

1245

TTG

TAA

Forward

 

222

cob

Protein

7509

8618

1110

ATA

TAG

Forward

 

32

trnP

tRNA

8619

8672

54

  

Forward

UGG

0

nad6

Protein

8673

9122

450

TTA

TAA

Forward

 

0

trnG

tRNA

9123

9179

57

  

Forward

UCC

0

nad4L

Protein

9182

9412

231

TTA

TAG

Forward

 

2

NCR1

         

trnR

tRNA

17145

17074

72

  

Reverse

UCG

7661

NCR2

         

trnK

tRNA

20303

20371

69

  

Forward

UUU

3157

rrnS

rRNA

20720

21317

598

  

Forward

 

348

trnS2

tRNA

21318

21380

63

  

Forward

UGA

0

trnY

tRNA

21380

21435

56

  

Forward

GUA

-1

trnW

tRNA

21436

21496

61

  

Forward

UCA

0

trnW

tRNA

21502

21561

60

  

Forward

CCA

5

nad1

Protein

21563

22422

860

TTA

GT

Forward

 

1

trnQ

tRNA

22423

22472

50

  

Forward

UUG

0

trnC

tRNA

22532

22604

73

  

Forward

GCA

59

trnE

tRNA

22606

22661

56

  

Forward

UUC

1

trnS1

tRNA

22714

22771

58

  

Forward

UCU

52

trnL2

tRNA

22772

22827

56

  

Forward

UAA

0

trnV

tRNA

22864

22917

54

  

Forward

UAC

36

trnL1

tRNA

23095

23150

56

  

Forward

UAG

177

cox2

Protein

23154

23823

670

TTA

T

Forward

 

3

trnH

tRNA

23824

23875

52

  

Forward

GUG

0

rrnL

rRNA

23876

24776

901

  

Forward

 

0

nad3

Protein

24777

25112

336

ATT

TAA

Forward

 

0