Index | nad1 (894 bp) | cox1 (1608 bp) | nad1–cox1 (2502 bp) | ||||||
---|---|---|---|---|---|---|---|---|---|
Cattle | Buffalo | Overall | Cattle | Buffalo | Overall | Cattle | Buffalo | Overall | |
No. of isolates | 32 | 20 | 52 | 32 | 20 | 52 | 32 | 20 | 52 |
No. of mutations | 11 | 9 | 13 | 24 | 12 | 29 | 35 | 21 | 42 |
Parsimony informative sites | 8 | 6 | 8 | 12 | 9 | 15 | 20 | 15 | 23 |
No. of haplotypes | 10 | 7 | 12 | 17 | 11 | 23 | 23 | 16 | 34 |
Haplotype diversity (Hd) | 0.865 | 0.805 | 0.834 | 0.933 | 0.900 | 0.925 | 0.968 | 0.963 | 0.972 |
Nucleotide diversity (Ï€) | 0.00304 | 0.00287 | 0.00293 | 0.00247 | 0.00185 | 0.00223 | 0.00267 | 0.00222 | 0.00248 |
Tajima’s D | − 0.01118 | 0.04283 | − 0.26602 | − 1.17027 | − 0.42821 | − 1.45764 | − 0.83097 | –0.23976 | − 1.13030 |
Fu’s Fs | − 1.672 | − 0.453 | − 2.207 | − 6.720* | − 3.927* | − 11.823* | − 10.559* | − 7.575* | − 21.380* |