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Table 2 Diversity and neutrality indices for Echinococcus granulosus (s.s.) populations from Pakistan

From: Echinococcus granulosus (sensu stricto) (G1, G3) and E. ortleppi (G5) in Pakistan: phylogeny, genetic diversity and population structural analysis based on mitochondrial DNA

Index

nad1 (894 bp)

cox1 (1608 bp)

nad1–cox1 (2502 bp)

Cattle

Buffalo

Overall

Cattle

Buffalo

Overall

Cattle

Buffalo

Overall

No. of isolates

32

20

52

32

20

52

32

20

52

No. of mutations

11

9

13

24

12

29

35

21

42

Parsimony informative sites

8

6

8

12

9

15

20

15

23

No. of haplotypes

10

7

12

17

11

23

23

16

34

Haplotype diversity (Hd)

0.865

0.805

0.834

0.933

0.900

0.925

0.968

0.963

0.972

Nucleotide diversity (Ï€)

0.00304

0.00287

0.00293

0.00247

0.00185

0.00223

0.00267

0.00222

0.00248

Tajima’s D

− 0.01118

0.04283

− 0.26602

− 1.17027

− 0.42821

− 1.45764

− 0.83097

–0.23976

− 1.13030

Fu’s Fs

− 1.672

− 0.453

− 2.207

− 6.720*

− 3.927*

− 11.823*

− 10.559*

− 7.575*

− 21.380*

  1. * Significant (P < 0.05)