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Table 2 Genetic diversity within Cryptosporidium parvum populations based on analysis of the concatenated sequences from eight genetic loci

From: Population structure and geographical segregation of Cryptosporidium parvum IId subtypes in cattle in China

Population

n

H

Hd

LD (|D’|)

Rms

Location

 Guangdong

10

6

0.78

Y = 1.0000 + 0.0000X

0

 Hebei

10

1

0.00

–

–

 Heilongjiang

5

1

0.00

–

–

 Jiangsu

4

2

0.67

–

0

 Shanghai

9

7

0.94

Y = 0.9295 + 0.0350X

1

 Xinjiang

3

3

1.00

Y = 1.0000 + 0.0000X

0

gp60 subtypes

 IIdA19G1

23

12

0.85

Y = 0.8811 + 0.0177X

1

 IIdA20G1

15

2

0.48

–

0

 IIdA15G1

3

3

1.00

Y = 1.0000 + 0.0000X

0

Total

41

17

0.89

Y = 0.9994 −0.0041X

1

  1. Abbreviations: n number of multilocus genotypes, H number of haplotypes (types based on SNPs alone), Hd gene diversity; LD (ǀD’ǀ), linkage disequilibrium between sites, where X is the nucleotide distance (measured in kilobases); Rms minimum number of recombination events
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Parasites & Vectors

ISSN: 1756-3305

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