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Table 1 Prevalence and distribution of Enterocytozoon bieneusi genotypes in rodents in the different countries or areas

From: Prevalence, genetic diversity and implications for public health of Enterocytozoon bieneusi in various rodents from Hainan Province, China

Country

Rodent species

No. positive/no. examined (%)

Genotype (n)

Reference

China

Bamboo rat (Rhizomys sinensis)

22/435 (5.1)

D (17); EbpA (1); J (1); PigEBITS7 (1); BR1 (1); BR2 (1)

12

Brown rat (Rattus norvegicus)

19/242 (7.9)

D (17); Peru6 (2)

13

Bower’s white-toothed rat (Berylmys bowersi)

37/117 (31.6)

D (14); K (8); PigEBITS7 (22); Peru8 (2); CQR-1 (10); CQR-2 (15); CQR-3 (1); GDR-1(2); GDR-2 (1); GDR3 (1)

14

Edwardʼs long-tailed rat (Leopoldamys edwardsi)

39/111 (35.1)

Experimental ratsa

14/291 (4.8)

EbpA (7); EbpC (3); CHY1 (2); N (1); SHR1 (1)

15

Chinchilla (Chinchilla lanigera)

5/140 (3.6)

BEB6 (3); D (2)

16

Chipmunk (Eutamias asiaticus)

49/279 (17.6)

SCC-1 (17); SCC-2 (9); D (6); CHY1 (5); SCC-3 (5); Nig 7 (4); CHG9 (2); SCC-4 (1)

17

Red-bellied tree squirrel (Callosciurus erythraeus)

24/144 (16.7)

D (18); EbpC (3); SC02 (1); CE01 (1); CE02 (1)

18

Red squirrel (Sciurus vulgaris)

61/314 (19.4)

D (27); SCC-2 (18); SCC-3 (12); RS01 (2); RS02 (2)

19

Rodentsb

8/199 (4.0)

CHG14 (3); BEB6 (2); D (2); CHG2 (1)

20

Czech-Germany border

East-European house mouse (Mus m. musculus)

14/127 (11.0)

EpbA (2); D (6); PigEBITS5 (4); C (1); H (1)

21

West-European house mouse (Mus m. domesticus)

17/162 (10.5)

CZ3 (4); PigEBITS5 (3); D (4); Peru 8 (4); S6 (1); C (1)

21

Peru

Guinea pig (Cavia porcellus)

7/8 (87.5)

Preu 16 (7)

22

Poland

Striped field mouse (Apodemus agrarius)

79/184 (42.9)

D (6); gorilla 1 (1); WR5 (1); WR7 (1); WR8 (2)

23

Yellow-necked mouse (Apodemus flavicollis)

18/60 (30.0)

D (2); WR4 (1); WR6 (6); WR1 (1); WR9 (1)

23

Bank vole (Myodes glareolus)

18/46 (39.1)

D (2); WR6 (2); WR10 (2); WR2 (1)

23

House mouse (Mus musculus)

6/21 (28.6)

WR3 (1)

23

Slovakia

House mouse (Mus musculus musculus)

3/280 (1.1)

Unknown (3)

24

USA

Eastern gray squirrel (Sciurus carolinensis)

11/34 (32.4)

Type IV (3); WL4 (5); WW6 (2); PtEbV+WL21 (1)

11

Eastern chipmunk (Tamias striatus)

5/7 (71.4)

Type IV (1); WL4 (3); WL23 (1)

11

Woodchuck (Marmota monax)

5/5 (100)

Type IV+WL20 (1); WL4 (2); WL22 (1); WW6 (1)

11

Deer mouse (Peromyscus sp.)

13/55 (23.6)

WL4 (10); WL23 (2); WL25 (1)

11

Boreal red-backed vole (Myodes gapperi)

1/5 (20.0)

WL20+WL21(1)

11

Meadow vole (Microtus pennsylvanicus)

3/10 (30.0)

Peru11 (1); Peru11+Type IV (1); WL21+unknown (1)

11

Prairie dog (Cynomys ludovicianus)

14/29 (48.3)

Row (14)

25

  1. aExperimental rats including 104 wistar rats, 87 sprague dawley rats and 100 spontaneously hypertensive rats
  2. bRodents including 168 brown rats (Rattus norvegicus) and 31 house mice (Mus musculus)
  3. Notes: Genotypes detected in humans are shown in bold