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Table 2 Contigs with Blast hits to the small subunit (SSU) 18S rRNA in the nt/nr database

From: Meta-transcriptomic identification of Trypanosoma spp. in native wildlife species from Australia

Host Contig accession Length TPM Tryp e-value Hit Gene SSU TPM cox1
Swamp wallaby (Wallabia bicolor) #1 VERT1_DN159759_c0_g1_i1* 299 3.27 9E−152 Trypanosoma sp. TL.AQ.22 18S rRNA 30192.26
VERT1_DN215626_c0_g1_i1* 318 3.06 3E−162 Trypanosoma sp. TL.AQ.45 18S rRNA
Regent honeyeater (Anthochaera phrygia) VERT11_DN10127_c0_g1_i1* 666 2.82 0.00E+00 Trypanosoma thomasbancrofti 18S rRNA 512.02
Bare-nosed wombat (Vombatus ursinus) VERT18_DN14693_c0_g1_i1* 615 2.94 0.00E+00 Trypanosoma sp. 18S rRNA 3805.74
VERT18_DN33207_c0_g1_i1 241 3.42 1E−118 Trypanosoma sp. AB-2013 18S rRNA
VERT18_DN9224_c0_g1_i1 491 1.87 0.00E+00 Trypanosoma sp. 18S rRNA
Southern brown bandicoot (Isoodon obesulus) VERT21_DN254377_c0_g1_i1* 411 0.64 0.00E+00 Trypanosoma sp. LM-2010 18S rRNA 577.36
Koala (Phascolarctos cinereus) VERT22_DN394953_c0_g1_i1* 241 0.86 3E−118 Trypanosoma irwini 18S rRNA 2622.98
Eastern dwarf tree frog (Litoria fallax) VERT43_DN68004_c3_g3_i2* 1728 46.71 0.00E+00 Trypanosoma sp. 858 18S rRNA 1258.51
Swamp wallaby (Wallabia bicolor) #2 VERT48_DN150018_c0_g6_i1 718 55.01 0.00E+00 Trypanosoma pestanai LEM 110 18S rRNA 2152.22
VERT48_DN190740_c0_g1_i1* 433 3.59 0.00E+00 Trypanosoma sp. H26 18S rRNA
VERT48_DN367248_c0_g1_i1* 890 743.4 0.00E+00 Trypanosoma sp. LM-2010 18S rRNA
  1. * Contigs used for phylogenetic analysis based on the composition chi-square test performed by IQ-TREE