Skip to main content

Table 2 Annotated transcripts found DE and containing condition-specific polymorphisms

From: Molecular basis of resistance to organophosphate insecticides in the New World screw-worm fly

ID log2FC SNP positions Common name (if available) and GO terms
c12633_g1_i1 −1.34 171, 212 GO:0007165 signal transduction, GO:0006508 proteolysis, GO:0006412 translation, GO:0051301 cell division
GO:0005840 ribosome, GO:0003735 structural constituent of ribosome, GO:0004197 cysteine-type endopeptidase activity, GO:0000166 nucleotide binding
c12633_g1_i5 −1.31 171, 569, 212, 309, 294, 354
c12908_g1_i1 −3.45 1362 cytochrome P450 - GO:0020037 heme binding, GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 monooxygenase activity, GO:0005506 iron ion binding, GO:0055114 oxidation-reduction process
c13437_g3_i1 1.37 524 GO:0008289 lipid binding
c13628_g1_i1 −1.27 554 GO:0030246 carbohydrate binding
c13820_g1_i1 1.78 142, 343 GO:0004252 serine-type endopeptidase activity, GO:0010765 positive regulation of sodium ion transport, GO:0006508 proteolysis GO:0007586 digestion, GO:0005615 extracellular space, GO:0005886 plasma membrane
c13820_g1_i7 1.93 500
c13993_g1_i2 1.35 185 GO:0008199 ferric iron binding, GO:0006879 cellular iron ion homeostasis, GO:0006826 iron ion transport, GO:0005576 extracellular region
c14119_g1_i1 −1.38 1006 GO:0004321 fatty-acyl-CoA synthase activity, GO:0004467 long-chain fatty acid-CoA ligase activity, GO:0016207 4-coumarate-CoA ligase activity , GO:0008756 o-succinylbenzoate-CoA ligase activity, GO:0009851 auxin biosynthetic process, GO:0009695 jasmonic acid biosynthetic process, GO:0001676 long-chain fatty acid metabolic process, GO:0005777 peroxisome
C14131_g2_i3 −1.33 1250 bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase - GO:0004781 sulfate adenylyltransferase (ATP) activity | GO:0005524 ATP binding | GO:0004020 adenylylsulfate kinase activity, GO:0016310 phosphorylation, GO:0000103 sulfate assimilation
c14544_g1_i4 −3.45 1177, 1597 GO:0004157 dihydropyrimidinase activity, GO:0051219 phosphoprotein binding, GO:0006212 uracil catabolic process, GO:0005737 cytoplasm
C8201_g1_i1 1.80 324 Cuticle 1 - GO:0042302 structural constituent of cuticle