Table 1. Mapping and classification of reads against the Trichomonas vaginalis genome

Clean reads

6,909,748

7,811,640

6,186,244

20,907,632

Un-mapped reads

606,218

739,800

375,450

1,721,468

Mapped reads

6,303,530

7,071,840

5,809,794

19,185,164

mRNAs

190,790

322,082

651,191

1,164,063

5′UTR

3765

5245

7938

16,948

CDS

186,694

316,213

642,807

1,145,714

3′UTR

1219

1648

2095

4962

rRNAs

2,772,196

2,639,586

1,807,762

7,219,544

tRNAs

955,479

1,076,990

624,938

2,657,407

miRNAs

39,596

57,388

44,879

141,863

sn/snoRNAs

1331

1521

1532

4384

Unannoted small RNAs

2,344,138

2,974,273

2,679,492

7,997,903