From: Development of genome-wide polymorphic microsatellite markers for Trichinella spiralis
Repeat | Mononucleotide | Dinucleotide | Trinucleotide | Tetranucleotide | Pentanucleotide | Hexanucleotide | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Motif | % | Motif | % | Motif | % | Motif | % | Motif | % | Motif | % | |
Common | A/T | 59.43 | AT/AT | 61.84 | AAT/ATT | 39.28 | AAAT/ATTT | 37.30 | AAAAT/ATTTT | 18.07 | AAAAAT/ATTTTT | 10.87 |
 | C/G | 40.57 | AC/GT | 24.53 | AAC/GTT | 22.21 | AAAC/GTTT | 15.27 | AAATT/AATTT | 10.53 | AAAATT/AATTTT | 6.67 |
 |  |  | AG/CT | 13.38 | AAG/CTT | 10.06 | AATT/AATT | 7.95 | AATAT/ATATT | 9.72 | AAAAAG/CTTTTT | 5.19 |
 |  |  | CG/CG | 0.24 | ATC/ATG | 9.46 | AATG/ATTC | 6.13 | AAAAC/GTTTT | 7.97 | AAAATG/ATTTTC | 4.31 |
 |  |  |  |  | AGC/CTG | 6.58 | ACAT/ATGT | 4.93 | AATAC/ATTGT | 7.22 | AAATTT/AAATTT | 3.52 |
 |  |  |  |  | Other | 12.40 | Other | 28.42 | Other | 46.49 | Other | 69.45 |
Longest | (G)184 | (TG)54 | (ATA)64 | (CATA)17 | (TATAA)98 | (AATAGT)9 (TGTATA)9 (TATATG)9 (ATATAC)9 |