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Table 1 Comparison of the annotated mitochondrial genomes of Brachydistomum sp., Brachylecithum sp. and Lyperosomum longicauda

From: Molecular phylogenetics and mitogenomics of three avian dicrocoeliids (Digenea: Dicrocoeliidae) and comparison with mammalian dicrocoeliids

Gene/region

Position (5′-3′)

Length (bp)

Start codon

Stop codon

Anti-codon

Identity (%)

Brachydistomum sp./Brachylecithum sp./Lyperosomum longicauda

Bd-Bl/Bd-Ll/Bl-Ll/A

 cox3

1/1/1

651/651/645

651/651/645

ATG/ATG/ATG

TAA/TAG/TAA

 

78.34/62.98/64.82/68.71

 trnH

691/661/663

764/723/729

74/63/67

  

GTG/GTG/GTG

55.41/51.35/75.36/60.71

 cytb

768/724/733

1886/1833/1848

1119/1110/1116

ATG/GTG/ATG

TAG/TAG/TAG

 

79.54/77.39/76.97/77.97

 nad4L

1891/1826/1849

2160/2089/2118

270/264/270

ATG/ATG/GTG

TAA/TAA/TAA

 

72.59/62.64/67.40/67.54

 nad4

2121/2050/2082

3389/3318/3365

1269/1269/1284

ATG/ATG/GTG

TAG/TAG/TAG

 

69.74/62.55/66.05/66.11

 trnQ

3397/3329/3375

3458/3391/3436

62/63/62

  

TTG/TTG/TTG

84.13/76.19/77.78/79.37

 trnF

3462/3394/3440

3523/3456/3504

62/63/65

  

GAA/GAA/GAA

95.24/81.82/81.82/86.29

 trnM

3524/3457/3503

3584/3517/3565

61/61/63

  

CAT/CAT/CAT

96.72/74.60/74.60/81.98

 atp6

3585/3518/3566

4094/4027/4084

510/510/519

ATG/ATG/ATG

TAA/TAG/TAG

 

58.91/57.36/54.78/57.02

 nad2

4101/4028/4091

4967/4900/4963

867/873/873

ATG/TTG/ATG

TAG/TAG/TAG

 

65.29/60.54/58.59/61.48

 trnV

4985/4913/4974

5048/4976/5043

64/64/70

  

TAC/TAC/TAC

75.38/81.43/74.29/77.03

 trnA

5055/4980/5050

5122/5041/5115

68/62/66

  

TGC/TGC/TGC

73.53/73.53/74.24/73.77

 trnD

5132/5045/5116

5200/5111/5184

69/67/69

  

GTC/GTC/GTC

77.14/68.06/71.01/72.07

 nad1

5202/5113/5185

6108/6016/6090

907/904/906

GTG/GTG/ATG

T/T/TAA

 

75.52/71.40/70.63/72.52

 trnN

6109/6020/6103

6174/6083/6171

66/64/69

  

GTT/GTT/GTT

69.12/75.36/69.57/71.35

 trnP

6184/6098/6177

6254/6163/6249

71/66/73

  

TGG/TGG/TGG

64.79/63.64/67.12/65.18

 trnI

6270/6164/6256

6334/6227/6321

65/64/66

  

GAT/GAT/GAT

80.00/83.33/74.24/79.19

 trnK

6344/6244/6333

6410/6310/6399

67/67/67

  

CTT/TTT/CTT

65.71/67.14/65.22/66.02

 nad3

6411/6310/6402

6759/6658/6747

349/349/346

ATG/GTG/GTG

T/T/T

 

60.74/57.31/65.90/61.32

 trnS1

6760/6659/6748

6818/6718/6804

59/60/57

  

TCT/GCT/GCT

65.00/66.10/75.00/68.70

 trnW

6850/6721/6806

6914/6780/6870

65/60/65

  

TCA/TCA/TCA

70.77/81.54/69.23/73.85

 cox1

6923/6784/6891

8479/8334/8438

1557/1551/1548

ATG/TTG/ATG

TAG/TAG/TAG

 

79.77/75.21/79.13/78.04

 trnT

8502/8376/8451

8564/8437/8518

63/62/68

  

TGT/TGT/TGT

70.77/69.12/66.67/68.85

 rrnL

8567/8439/8519

9546/9414/9508

980/976/990

   

77.36/73.69/74.00/75.02

 trnC

9547/9415/9509

9612/9477/9570

66/63/62

  

GCA/GCA/GCA

80.30/74.24/73.02/75.85

 rrnS

9613/9478/9571

10324/10226/10304

712/749/734

   

74.74/68.18/72.35/71.76

 cox2

10325/10227/10305

10957/10865/10895

633/639/591

ATG/ATG/ATG

TAG/TAG/TAG

 

56.99/62.11/58.07/59.06

 nad6

10964/10879/ 10916

11413/11340/11365

450/462/450

GTG/ATG/ATG

TAG/TAG/TAG

 

59.05/64.44/65.52/63.00

 trnY

11416/11346/11366

11488/11407/11428

73/62/63

  

GTA/GTA/GTA

58.90/65.75/61.54/62.07

 trnL1

11497/11408/11433

11560/11474/11495

64/67/63

  

TAG/TAG/TAG

52.17/69.23/69.12/63.51

 trnS2

11566/11480/11497

11634/11543/11562

69/64/66

  

TGA/TGA/TGA

47.83/62.86/55.22/55.30

 trnL2

11639/11549/11564

11702/11612/11629

64/64/66

  

TAA/TAA/TAA

73.85/74.24/76.12/74.74

 trnR

11711/11629/11634

11778/11695/11694

68/67/61

  

TCG/TCG/TCG

54.93/57.35/52.24/54.84

 nad5

11782/11698/11697

13353/13275/13274

1572/1578/1578

GTG/ATG/ATG

TAA/TAG/TAA

 

64.50/60.23/60.45/61.73

 trnG

−/−/13277

−/−/13340

−/−/64

  

−/−/TCC

 

 SNCR

−/−/13341

−/−/13738

−/−/398

    

 trnE

−/−/13739

−/−/13800

−/−/62

  

−/−/TTC

 

 LNCR

−/−/13801

−/−/14567

−/−/767

 

TAA/TAG/TAA

  
  1. Abbreviations: Bd, Brachydistomum sp.; Bl, Brachylecithum sp.; Ll, Lyperosomum longicauda; A, average identity values (%) of the three dicrocoeliids