Skip to main content

Advertisement

Table 1 Comparison of the annotated mitochondrial genomes of Brachydistomum sp., Brachylecithum sp. and Lyperosomum longicauda

From: Molecular phylogenetics and mitogenomics of three avian dicrocoeliids (Digenea: Dicrocoeliidae) and comparison with mammalian dicrocoeliids

Gene/regionPosition (5′-3′)Length (bp)Start codonStop codonAnti-codonIdentity (%)
Brachydistomum sp./Brachylecithum sp./Lyperosomum longicaudaBd-Bl/Bd-Ll/Bl-Ll/A
 cox31/1/1651/651/645651/651/645ATG/ATG/ATGTAA/TAG/TAA 78.34/62.98/64.82/68.71
 trnH691/661/663764/723/72974/63/67  GTG/GTG/GTG55.41/51.35/75.36/60.71
 cytb768/724/7331886/1833/18481119/1110/1116ATG/GTG/ATGTAG/TAG/TAG 79.54/77.39/76.97/77.97
 nad4L1891/1826/18492160/2089/2118270/264/270ATG/ATG/GTGTAA/TAA/TAA 72.59/62.64/67.40/67.54
 nad42121/2050/20823389/3318/33651269/1269/1284ATG/ATG/GTGTAG/TAG/TAG 69.74/62.55/66.05/66.11
 trnQ3397/3329/33753458/3391/343662/63/62  TTG/TTG/TTG84.13/76.19/77.78/79.37
 trnF3462/3394/34403523/3456/350462/63/65  GAA/GAA/GAA95.24/81.82/81.82/86.29
 trnM3524/3457/35033584/3517/356561/61/63  CAT/CAT/CAT96.72/74.60/74.60/81.98
 atp63585/3518/35664094/4027/4084510/510/519ATG/ATG/ATGTAA/TAG/TAG 58.91/57.36/54.78/57.02
 nad24101/4028/40914967/4900/4963867/873/873ATG/TTG/ATGTAG/TAG/TAG 65.29/60.54/58.59/61.48
 trnV4985/4913/49745048/4976/504364/64/70  TAC/TAC/TAC75.38/81.43/74.29/77.03
 trnA5055/4980/50505122/5041/511568/62/66  TGC/TGC/TGC73.53/73.53/74.24/73.77
 trnD5132/5045/51165200/5111/518469/67/69  GTC/GTC/GTC77.14/68.06/71.01/72.07
 nad15202/5113/51856108/6016/6090907/904/906GTG/GTG/ATGT/T/TAA 75.52/71.40/70.63/72.52
 trnN6109/6020/61036174/6083/617166/64/69  GTT/GTT/GTT69.12/75.36/69.57/71.35
 trnP6184/6098/61776254/6163/624971/66/73  TGG/TGG/TGG64.79/63.64/67.12/65.18
 trnI6270/6164/62566334/6227/632165/64/66  GAT/GAT/GAT80.00/83.33/74.24/79.19
 trnK6344/6244/63336410/6310/639967/67/67  CTT/TTT/CTT65.71/67.14/65.22/66.02
 nad36411/6310/64026759/6658/6747349/349/346ATG/GTG/GTGT/T/T 60.74/57.31/65.90/61.32
 trnS16760/6659/67486818/6718/680459/60/57  TCT/GCT/GCT65.00/66.10/75.00/68.70
 trnW6850/6721/68066914/6780/687065/60/65  TCA/TCA/TCA70.77/81.54/69.23/73.85
 cox16923/6784/68918479/8334/84381557/1551/1548ATG/TTG/ATGTAG/TAG/TAG 79.77/75.21/79.13/78.04
 trnT8502/8376/84518564/8437/851863/62/68  TGT/TGT/TGT70.77/69.12/66.67/68.85
 rrnL8567/8439/85199546/9414/9508980/976/990   77.36/73.69/74.00/75.02
 trnC9547/9415/95099612/9477/957066/63/62  GCA/GCA/GCA80.30/74.24/73.02/75.85
 rrnS9613/9478/957110324/10226/10304712/749/734   74.74/68.18/72.35/71.76
 cox210325/10227/1030510957/10865/10895633/639/591ATG/ATG/ATGTAG/TAG/TAG 56.99/62.11/58.07/59.06
 nad610964/10879/ 1091611413/11340/11365450/462/450GTG/ATG/ATGTAG/TAG/TAG 59.05/64.44/65.52/63.00
 trnY11416/11346/1136611488/11407/1142873/62/63  GTA/GTA/GTA58.90/65.75/61.54/62.07
 trnL111497/11408/1143311560/11474/1149564/67/63  TAG/TAG/TAG52.17/69.23/69.12/63.51
 trnS211566/11480/1149711634/11543/1156269/64/66  TGA/TGA/TGA47.83/62.86/55.22/55.30
 trnL211639/11549/1156411702/11612/1162964/64/66  TAA/TAA/TAA73.85/74.24/76.12/74.74
 trnR11711/11629/1163411778/11695/1169468/67/61  TCG/TCG/TCG54.93/57.35/52.24/54.84
 nad511782/11698/1169713353/13275/132741572/1578/1578GTG/ATG/ATGTAA/TAG/TAA 64.50/60.23/60.45/61.73
 trnG−/−/13277−/−/13340−/−/64  −/−/TCC 
 SNCR−/−/13341−/−/13738−/−/398    
 trnE−/−/13739−/−/13800−/−/62  −/−/TTC 
 LNCR−/−/13801−/−/14567−/−/767 TAA/TAG/TAA  
  1. Abbreviations: Bd, Brachydistomum sp.; Bl, Brachylecithum sp.; Ll, Lyperosomum longicauda; A, average identity values (%) of the three dicrocoeliids